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SCNpilot_expt_500_bf_scaffold_8124

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8124_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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51..881
DNA (831bp) protein (277aa)
Uncharacterized protein n=7 Tax=Pseudomonas aeruginosa RepID=U8TT76_PSEAI
UPF0380 protein {ECO:0000313|EMBL:CEI04226.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8124_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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947..3070
DNA (2124bp) protein (708aa)
ParB nuclease n=1 Tax=Ralstonia sp. PBA RepID=I9W3J9_9RALS
Nuclease {ECO:0000313|EMBL:GAO21782.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
ParB domain-containing protein nuclease; K03497 chromosome partitioning protein, ParB family
SCNpilot_expt_500_bf_scaffold_8124_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3015..3194
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E6E084
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46611.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_500_bf_scaffold_8124_4
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3320..3547)
DNA (228bp) protein (76aa)
Diguanylate phosphodiesterase n=5 Tax=Proteobacteria RepID=D0L020_HALNC
Diguanylate phosphodiesterase {ECO:0000313|EMBL:AJW47328.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
diguanylate phosphodiesterase
SCNpilot_expt_500_bf_scaffold_8124_5
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3567..3803)
DNA (237bp) protein (79aa)
MerE n=15 Tax=Enterobacteriaceae RepID=C4NV40_ECOLX
merE; mercury resistance protein
Mercury resistance protein {ECO:0000313|EMBL:AJW47329.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
SCNpilot_expt_500_bf_scaffold_8124_6
Pseudomonas sp. ED23-33, Proteobacteria, Bacteria

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comp(3800..4165)
DNA (366bp) protein (122aa)
HTH-type transcriptional regulator MerD n=29 Tax=Bacteria RepID=MERD_SERMA
merD; mercuric resistance transcriptional repressor protein MerD
MerD2 protein {ECO:0000313|EMBL:CAC14705.1}; TaxID=83781 species="Bacteria; Proteobacteria.;" source="Pseudomonas sp. ED23-33.;"
SCNpilot_expt_500_bf_scaffold_8124_7
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4186..5832)
DNA (1647bp) protein (549aa)
merA; mercuric reductase (EC:1.16.1.1); K00520 mercuric reductase [EC:1.16.1.1]
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
mercuric reductase n=1 Tax=Methyloversatilis universalis RepID=UPI00035E6246
SCNpilot_expt_500_bf_scaffold_8124_8
Pantoea agglomerans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5876..6301)
DNA (426bp) protein (142aa)
Inner membrane Hg(II) uptake protein n=85 Tax=Proteobacteria RepID=Q7BRH8_ECOLX
merC; mercury transport protein MerC
MerC protein {ECO:0000313|EMBL:CAA70183.1}; TaxID=549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea; Pantoea agglomerans group.;" source="Enterobacter agglomerans (Erwinia herbicola) (Pantoea agglomerans).;"
SCNpilot_expt_500_bf_scaffold_8124_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6330..6605)
DNA (276bp) protein (92aa)
Mercuric transport protein periplasmic component n=25 Tax=Proteobacteria RepID=MERP_ACICA
merP; mercuric transport periplasmic binding protein; K08364 periplasmic mercuric ion binding protein
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_8124_10

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comp(6619..7023)
DNA (405bp) protein (135aa)
mercury transporter n=1 Tax=Comamonas sp. B-9 RepID=UPI000395B1D7
Mercuric transport protein MerT {ECO:0000313|EMBL:BAH90194.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
merT; putative mercuric transport protein; K08363 mercuric ion transport protein
SCNpilot_expt_500_bf_scaffold_8124_11
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7041..7493
DNA (453bp) protein (151aa)
Transcriptional regulator, MerR family n=2 Tax=root RepID=D5X714_THIK1
MerR family transcriptional regulator; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ADG32523.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Displaying 11 items

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