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SCNpilot_expt_500_bf_scaffold_3329

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3329_1
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..352
DNA (351bp) protein (117aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
isoleucyl-tRNA synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037F937E
SCNpilot_expt_500_bf_scaffold_3329_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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349..1701
DNA (1353bp) protein (451aa)
folylpolyglutamate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
Dihydrofolate synthase/folylpolyglutamate synthase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A2H6_9MICO rbh
Folylpolyglutamate synthase {ECO:0000313|EMBL:EXJ52813.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_expt_500_bf_scaffold_3329_3
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1698..2108
DNA (411bp) protein (137aa)
Allophanate hydrolase subunit 2 n=1 Tax=Microbacterium sp. TS-1 RepID=U2XIC1_9MICO
Allophanate hydrolase subunit 2 {ECO:0000313|EMBL:GAD32980.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
allophanate hydrolase subunit 2
SCNpilot_expt_500_bf_scaffold_3329_4
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2110..2526
DNA (417bp) protein (139aa)
Nucleoside diphosphate kinase {ECO:0000256|RuleBase:RU004013}; EC=2.7.4.6 {ECO:0000256|RuleBase:RU004013};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ndk; nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6]
Nucleoside diphosphate kinase n=2 Tax=Microbacterium RepID=H8E840_9MICO
SCNpilot_expt_500_bf_scaffold_3329_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2533..3138)
DNA (606bp) protein (202aa)
Vitamin K epoxide reductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E841_9MICO
Membrane protein {ECO:0000313|EMBL:EXJ52816.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3329_6
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3430..4365
DNA (936bp) protein (312aa)
rng; ribonuclease G and E; K08300 ribonuclease E [EC:3.1.26.12]
Ribonuclease E n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AM07_9MICO
Ribonuclease E {ECO:0000313|EMBL:EPD83227.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_500_bf_scaffold_3329_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4356..5813
DNA (1458bp) protein (486aa)
rng; ribonuclease G and E; K08300 ribonuclease E [EC:3.1.26.12]
Ribonuclease, Rne/Rng family n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E842_9MICO
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:EIC06882.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_3329_8
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5810..6178)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A2I0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52818.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3329_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6289..6597
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NE63_MICTS
rplU; ribosomal protein L21; K02888 large subunit ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_3329_10
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6616..6873
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=2 Tax=Microbacterium RepID=H8E845_9MICO
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
rpmA; ribosomal protein L27; K02899 large subunit ribosomal protein L27
SCNpilot_expt_500_bf_scaffold_3329_11
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6972..8492
DNA (1521bp) protein (507aa)
GTPase Obg n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A3F1_9MICO rbh
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
obgE; GTPase; K03979 GTP-binding protein
SCNpilot_expt_500_bf_scaffold_3329_12
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8489..9280
DNA (792bp) protein (264aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
proB; glutamate 5-kinase; K00931 glutamate 5-kinase [EC:2.7.2.11]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000372C28C rbh
SCNpilot_expt_500_bf_scaffold_3329_13
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9277..10548
DNA (1272bp) protein (424aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
proA; gamma-glutamyl phosphate reductase; K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
Gamma-glutamyl phosphate reductase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A2I2_9MICO rbh
SCNpilot_expt_500_bf_scaffold_3329_14
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10588..10815
DNA (228bp) protein (76aa)
4-hydroxybenzoate polyprenyltransferase n=2 Tax=Microbacterium RepID=H8E849_9MICO
4-hydroxybenzoate polyprenyltransferase {ECO:0000313|EMBL:KIC56075.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
4-hydroxybenzoate polyprenyltransferase
SCNpilot_expt_500_bf_scaffold_3329_15
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10826..11422
DNA (597bp) protein (199aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
nadD; nicotinic acid mononucleotide adenylyltransferase; K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NE69_MICTS
SCNpilot_expt_500_bf_scaffold_3329_16
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11419..12342
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E851_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83236.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
Displaying 16 items

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