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SCNpilot_expt_500_bf_scaffold_3890

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3890_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..894)
DNA (894bp) protein (298aa)
aldehyde dehydrogenase (EC:1.2.1.5); K00129 aldehyde dehydrogenase (NAD(P)+) [EC:1.2.1.5]
Aldehyde Dehydrogenase n=2 Tax=Microbacterium RepID=H8E922_9MICO
Aldehyde dehydrogenase {ECO:0000313|EMBL:EXJ53230.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_expt_500_bf_scaffold_3890_2
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1017..2471)
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037E5F27 rbh
Putative symporter YjmB {ECO:0000313|EMBL:KJL21434.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
major facilitator superfamily protein rbh
SCNpilot_expt_500_bf_scaffold_3890_3
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2544..2816)
DNA (273bp) protein (91aa)
Putative glutaredoxin.1 {ECO:0000313|EMBL:KJL32110.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJL32110.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Glutaredoxin n=1 Tax=Microbacterium sp. TS-1 RepID=U2YMF4_9MICO
glutaredoxin
SCNpilot_expt_500_bf_scaffold_3890_4
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2813..3943)
DNA (1131bp) protein (377aa)
glycosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
Glycosyl transferase family 2 n=2 Tax=Microbacterium RepID=H8E924_9MICO
Glycosyl transferase family 2 {ECO:0000313|EMBL:KIC59497.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
SCNpilot_expt_500_bf_scaffold_3890_5
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4061..5239)
DNA (1179bp) protein (393aa)
Polysaccharide deacetylase n=2 Tax=Microbacterium RepID=H8E925_9MICO
Xylanase {ECO:0000313|EMBL:KIC59496.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
xylanase/chitin deacetylase
SCNpilot_expt_500_bf_scaffold_3890_6
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5276..5938
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DC5912
Uncharacterized protein {ECO:0000313|EMBL:CDK01387.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3890_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6687..8744)
DNA (2058bp) protein (686aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U1ZX13_9MICC rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ73208.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_3890_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(8737..9693)
DNA (957bp) protein (319aa)
Modification methylase HgiDII {ECO:0000313|EMBL:CCH16266.1}; EC=2.1.1.37 {ECO:0000313|EMBL:CCH16266.1};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
site-specific DNA methylase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37] rbh
Modification methylase HgiDII n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KXG9_9ACTO rbh
SCNpilot_expt_500_bf_scaffold_3890_9
unknown

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9773..9898
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3890_10
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9919..11049)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2NP01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK30903.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
Displaying 10 items

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