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SCNpilot_expt_500_bf_scaffold_15858

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_15858_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..474)
DNA (474bp) protein (158aa)
Regulatory protein LuxR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5Q0_9MICO
Regulatory protein LuxR {ECO:0000313|EMBL:EIC07497.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
DNA-binding HTH domain-containing proteins
SCNpilot_expt_500_bf_scaffold_15858_2
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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586..930
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031FBFFE
Uncharacterized protein {ECO:0000313|EMBL:GAD35207.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_15858_3
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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927..2525
DNA (1599bp) protein (533aa)
acetate permease n=1 Tax=Microbacterium RepID=UPI0003819732
SSS family solute/sodium (Na+) symporter {ECO:0000313|EMBL:GAD35206.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
symporter; K14393 cation/acetate symporter
SCNpilot_expt_500_bf_scaffold_15858_4
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2533..3081)
DNA (549bp) protein (183aa)
methylated DNA-protein cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
Methylated-DNA/protein-cysteine methyltransferase n=2 Tax=Microbacterium RepID=H8E5P9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ50885.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_expt_500_bf_scaffold_15858_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3258..3764
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7V2_9MICO
ATPase AAA {ECO:0000313|EMBL:EXJ50884.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
superfamily I DNA and RNA helicase and helicase subunits
SCNpilot_expt_500_bf_scaffold_15858_6
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3772..6000
DNA (2229bp) protein (743aa)
Superfamily I DNA and RNA helicase or helicase subunit protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5P8_9MICO
ATPase AAA {ECO:0000313|EMBL:KIC60127.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
superfamily I DNA and RNA helicase and helicase subunits
SCNpilot_expt_500_bf_scaffold_15858_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5997..6842
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7V2_9MICO
Superfamily I DNA and RNA helicase or helicase subunit protein {ECO:0000313|EMBL:EIC07495.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
superfamily I DNA and RNA helicase and helicase subunits
SCNpilot_expt_500_bf_scaffold_15858_8
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6992..7414)
DNA (423bp) protein (141aa)
Large conductance mechanosensitive channel protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B9C9_9MICO
Large-conductance mechanosensitive channel {ECO:0000256|SAAS:SAAS00023935}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel
SCNpilot_expt_500_bf_scaffold_15858_9
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7434..7709)
DNA (276bp) protein (92aa)
FmdB family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003698822
FmdB family transcriptional regulator {ECO:0000313|EMBL:EXJ51023.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_15858_10
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7759..8844)
DNA (1086bp) protein (362aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
galU; UDP-glucose pyrophosphorylase; K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ASY6_9MICO
SCNpilot_expt_500_bf_scaffold_15858_11
unknown

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8920..9006
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 11 items

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