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SCNpilot_expt_500_bf_scaffold_16978

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_16978_1
unknown

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comp(1..75)
DNA (75bp) protein (25aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_16978_2
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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669..1613
DNA (945bp) protein (315aa)
RNAse Z (EC:3.1.26.11) rbh
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818, ECO:0000313|EMBL:CCW34126.1};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
Ribonuclease Z n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ESC5_9BACT rbh
SCNpilot_expt_500_bf_scaffold_16978_3
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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2073..2519
DNA (447bp) protein (149aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
trehalose-phosphatase; K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12]
Trehalose-phosphatase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EIY5_9CHLR
SCNpilot_expt_500_bf_scaffold_16978_4
Thermobaculum terrenum, Thermobaculum, Bacteria

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2546..3232
DNA (687bp) protein (229aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) (EC:2.4.1.15); K00697 trehalose 6-phosphate synthase [EC:2.4.1.15]
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000313|EMBL:ACZ41756.1}; EC=2.4.1.15 {ECO:0000313|EMBL:ACZ41756.1};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFQ0_THET1
SCNpilot_expt_500_bf_scaffold_16978_5
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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3357..4115
DNA (759bp) protein (253aa)
trehalose-6-phosphate synthase; K00697 trehalose 6-phosphate synthase [EC:2.4.1.15]
Trehalose-6-phosphate synthase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY28_THERP
Trehalose-6-phosphate synthase {ECO:0000313|EMBL:ACM05986.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
SCNpilot_expt_500_bf_scaffold_16978_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(4154..4624)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TXI9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH84922.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
SCNpilot_expt_500_bf_scaffold_16978_7
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5574..5975
DNA (402bp) protein (134aa)
Protein TolB n=1 Tax=Rhizobium sp. CF142 RepID=J1SHJ1_9RHIZ
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
tolB; translocation protein TolB; K03641 TolB protein
SCNpilot_expt_500_bf_scaffold_16978_8
unknown

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6247..6525
DNA (279bp) protein (93aa)

This feature has no annotations

Displaying 8 items

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