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SCNpilot_expt_500_bf_scaffold_846_6

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(4934..6997)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirD4 n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MHL2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 690.0
  • Bit_score: 1167
  • Evalue 0.0
  • rbh
Type IV secretion system protein VirD4 {ECO:0000313|EMBL:CCW16685.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 690.0
  • Bit_score: 1167
  • Evalue 0.0
type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 691.0
  • Bit_score: 1104
  • Evalue 0.0
  • rbh

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2064
ATGTCCGCCACGAAAATTCTCTGGGGCCAGGTCTTTGCGGTCGTCGGCCTGTCGCTCGCCGGTATCTGGGCCGCGACCCAGTGGACCGCTCAGGCGCTTGCCTATCAGCCCGAACTGGGTGAGCCCTGGTTCTGGCTGGGTCCGTGGCCGGTTTATCCGCCCCTGGCCTTCTTCTGGTGGTGGTTCGCTTATGACGCTTACGCTCCGAAGGTTTTCGAGACCGGCGCGTTCATCGCCGTATCGGGCACGATGGCCGCGATCCTTGTCGCGATCGCCATGTCGGTCTGGCGCGCACGCGAGGCAAAGCGATCGGAAACCTACGGCTCGGCGCGCTGGGCGAGTGAAAAGGAAATCCGCAAGGCCGGGCTCTATGCCGACGATGGCGTGGTCATCGGCTGGCACGACAAGTGCTATCTGCGCCACGATGGTCCCGAACATGTCTTGTGCTTCGCGCCGACCCGCTCGGGCAAGGGCGTCGGTCTCGTCATTCCCTCGCTGCTCGCCTGGCCGGGAAGCTGCATCGTCCATGACATCAAGGGCGAGAACTGGGAACTGACCGCGGGCTTTCGCGCGAAACATGGCCGCGTATTGCTGTTCGACCCCACCAATCCGGCGTCCAACGGCTACAATCCGCTGCTCGAAGTTCGCAAAGGCGAGTGGGAAGTGCGTGACGTCCAGAACGTCGCCGACGTGTTGATCGACCCCGAAGGCAGCCTCGAAAAGCGCAACCATTGGGAAAAGACCAGCCATGCGCTGCTGGTCGGCGCGATCCTCCATGTTCTCTATGCCGAAGCGGACAAGACACTGGCGGGAGTTGCTGCGTTCCTTTCCGATCCCCGCCACCCGATCGAGACCACCTTGCGCCGGATGAAAACGACCCCGCATCTGGGCGACGCCGGCGTCCACCCCGTCGTCGCGGCCGCCGCGCAGGAACTGCTCAACAAGTCGGAGAACGAACGCTCGGGCGTGCTATCGACCGCCATGTCGTTCCTGGGGCTCTATCGCGATCCGGTGGTTGCCAAAGTGACCGGCGCTTCCGACTGGCGCATTGCCGATCTGGTCGCATCCCCCCTGCCGGTTTCGCTCTACCTGGTGATCCCGCCCTCCGACATCAGTCGCACCAAACCACTCGTTCGCCTGATGCTCAACCAGATTGGCCGGCGTCTGACCGAGGAGCTGAAGGTCAAGGGCCAGCGTCAGCGTCTGCTGTTCATGCTCGACGAATTTCCGGCCCTGGGGCGGCTCGATTTCTTCGAGAGCGCGCTCGCTTTCGTCGCCGGATACGGCATCAAAGCCTTCCTGATCGCGCAGAGCCTCAACCAGATCGAGAAGGCTTATGGGCAGAACAACGCGATCCTCGACAATTGCCACGTCCGGGTCGCCTTCGCCGCCAATGACGAGCGCACCGCCAAGCGTGTATCCGATGCGCTGGGCACCGCTACTGAACAGCGATCGATGAAGAACTATGCCGGCCACCGCCTTTCGCCCTGGCTCGGCCATGTCATGGTCTCGCGCACCGAAACCGCGCGGCCCCTGATGACGCCGGGCGAGATCCAGCAATTCTGCGAAGATGAGGAAATCGTGTTCGTCGCCAGCACGCCGCCGATCCGGGCGATGAAGGCGCGCTACTATCTCGACCCCCGCTTCCAGGCACGCCTCCTTCCGCCGCCGAGGCCAAAACCGCTCGATCCGAAGCGGAGGCCTCGGGATGACTGGTCCGCGCTAGCCCCTGTGGCGGCACCGCCGGTTGCCGCGCACGATGTGTCCGGGGTCAAGGACGCCCGCCGGAAAGAGGGAAAAGGAGGTCAGACAGGTGATTGCACCGCTGATGCCGTGCCACAGGAGACATCGGTCGAAACCGCCAATGCGGGCATTCGCCGGGAACCGGAGCTTGGCGAACACGAAGAGGTCATACCACCTGAGCAGAATTCGGCTGCAGGAGACATGTCAGTGGGAGACGGCACGGACGACGATGCCGCGCCCAAAGTGCATCAGGACGATGGCACCATGCGGCGCAATGCCCGCAACGCCTCGCTCGATCCCGATGACGGGATCGTCTTATGA
PROTEIN sequence
Length: 688
MSATKILWGQVFAVVGLSLAGIWAATQWTAQALAYQPELGEPWFWLGPWPVYPPLAFFWWWFAYDAYAPKVFETGAFIAVSGTMAAILVAIAMSVWRAREAKRSETYGSARWASEKEIRKAGLYADDGVVIGWHDKCYLRHDGPEHVLCFAPTRSGKGVGLVIPSLLAWPGSCIVHDIKGENWELTAGFRAKHGRVLLFDPTNPASNGYNPLLEVRKGEWEVRDVQNVADVLIDPEGSLEKRNHWEKTSHALLVGAILHVLYAEADKTLAGVAAFLSDPRHPIETTLRRMKTTPHLGDAGVHPVVAAAAQELLNKSENERSGVLSTAMSFLGLYRDPVVAKVTGASDWRIADLVASPLPVSLYLVIPPSDISRTKPLVRLMLNQIGRRLTEELKVKGQRQRLLFMLDEFPALGRLDFFESALAFVAGYGIKAFLIAQSLNQIEKAYGQNNAILDNCHVRVAFAANDERTAKRVSDALGTATEQRSMKNYAGHRLSPWLGHVMVSRTETARPLMTPGEIQQFCEDEEIVFVASTPPIRAMKARYYLDPRFQARLLPPPRPKPLDPKRRPRDDWSALAPVAAPPVAAHDVSGVKDARRKEGKGGQTGDCTADAVPQETSVETANAGIRREPELGEHEEVIPPEQNSAAGDMSVGDGTDDDAAPKVHQDDGTMRRNARNASLDPDDGIVL*