ggKbase home page

SCNpilot_expt_500_bf_scaffold_1290_25

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(21647..21916)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirB3-like family protein n=2 Tax=Sphingomonadaceae RepID=F3X045_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 83.0
  • Bit_score: 161
  • Evalue 3.90e-37
Conjugal transfer protein {ECO:0000313|EMBL:EQB12126.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 83.0
  • Bit_score: 161
  • Evalue 5.40e-37
type IV secretory pathway, VirB3 family protein; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 83.0
  • Bit_score: 160
  • Evalue 3.50e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium lactosutens → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGACCGGCAAGGGGAAGTGGCGGGCTACCTGGTGCCGGTGCATCGCGCGCTGGCCGAGCCCATCCTGCTGGGCGGGGCGCCGCGTTCGCTCGCCATCGTCAACGGGACGCTCGCCGGTGCGATCGGCCTGGGACTGCGCCTGTGGATCGCCGGGCTGGTCCTCTGGGCCGTCGGTCACGGCCTCTCGGTCTGGGCCGCGCGGCGCGATCCGGCCTTCGTCGATGTCGCCCGCCGCCACCTAAAATATCCGGCCTGGATGCGGCCATGA
PROTEIN sequence
Length: 90
MDRQGEVAGYLVPVHRALAEPILLGGAPRSLAIVNGTLAGAIGLGLRLWIAGLVLWAVGHGLSVWAARRDPAFVDVARRHLKYPAWMRP*