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SCNpilot_expt_500_bf_scaffold_1290_26

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(21916..22251)

Top 3 Functional Annotations

Value Algorithm Source
Conjugative transfer protein TrbC n=1 Tax=Sphingobium japonicum BiD32 RepID=N1ML59_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 111.0
  • Bit_score: 171
  • Evalue 4.70e-40
Conjugative transfer protein TrbC {ECO:0000313|EMBL:KEZ19459.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 111.0
  • Bit_score: 172
  • Evalue 2.90e-40
type IV secretion system protein VirB2; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 113.0
  • Bit_score: 163
  • Evalue 4.00e-38

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Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGATCCCTGCCGTCCGGCGGGTGCTTCGCCGCCTGTCCCTTGCTCCCTTTGCGGTGATGGCCGCTCTCACCCTCTTGCCGGGCGAGGCCCATGCCTCGGGTTCGTCGATGCCCTGGGAAGCACCGCTGCAATCGATCCTCGAATCGATCGAAGGCCCGGTCGCCAAGATCGTTGCGGTGATCATCATTATCGCCACCGGTCTTGGTCTCGCCTTCGGCGATACGTCGGGCGGCTTCCGGCGCCTGATCCAGATCGTTTTCGGCCTGTCGATCGCCTTCGCTGCCAGTTCGTTCTTCCTCTCCTTCTTCAGCTTCGGCGGCGGAGCACTGGTGTGA
PROTEIN sequence
Length: 112
MIPAVRRVLRRLSLAPFAVMAALTLLPGEAHASGSSMPWEAPLQSILESIEGPVAKIVAVIIIIATGLGLAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALV*