ggKbase home page

SCNpilot_expt_500_bf_scaffold_25935_8

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(4249..4806)

Top 3 Functional Annotations

Value Algorithm Source
Candidate transporter n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y1R1_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 160.0
  • Bit_score: 280
  • Evalue 1.50e-72
transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 160.0
  • Bit_score: 280
  • Evalue 4.90e-73
Candidate transporter {ECO:0000313|EMBL:AEG92312.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 160.0
  • Bit_score: 280
  • Evalue 2.20e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ramlibacter tataouinensis → Ramlibacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGAATCCGAACGCCACCCAACTGTGGACCGCCCCGCGCTGGGCGCTGGCCATCCTGCTGGCGGTGCTGGGCATGCTGGGGCCGTTCTCGATCGACACCTACATCCCGGCGTTCTCGGCCATCAGCGCCTCGCTGCAGGCCACCCCGGTGCAGATGCAGCAAACGCTGAGCGCCTACCTGCTGGGTTTCGCCTTCATGAACCTGTTTCATGGCGCGCTGTCGGACAGCTTCGGGCGCCGGCCGGTCATTCTGTGGGGCGTGGCGCTGTTCGCGCTGGCCTCGGTGGGCTGCGCGCTGTCGCAAACCATCGGGCAGCTGATCTTCTTTCGCGCACTGCAGGGCTTTTCCACCGGCGCCGGCATCGTGGTGTCACGCGCCGTCATCCGCGACATGTTCCCGCCGGACCAAGCCCAGCGCGTGATGAGCCAGGTCACCATCTTCTTCGGCGTGGCACCGGCGGTGGCGCCCATCATCGGCGGCGTCATCGCCGCAACTGGCGCCTGCTGCCCGAGACCCTGCACACCAGCCACCGCCAGCCGTTCCAGGTGGGCCACCTGA
PROTEIN sequence
Length: 186
MNPNATQLWTAPRWALAILLAVLGMLGPFSIDTYIPAFSAISASLQATPVQMQQTLSAYLLGFAFMNLFHGALSDSFGRRPVILWGVALFALASVGCALSQTIGQLIFFRALQGFSTGAGIVVSRAVIRDMFPPDQAQRVMSQVTIFFGVAPAVAPIIGGVIAATGACCPRPCTPATASRSRWAT*