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SCNpilot_expt_500_bf_scaffold_25935_9

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(4886..5383)

Top 3 Functional Annotations

Value Algorithm Source
UPI000399B68C related cluster n=1 Tax=unknown RepID=UPI000399B68C similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 165.0
  • Bit_score: 315
  • Evalue 3.00e-83
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 165.0
  • Bit_score: 315
  • Evalue 4.20e-83
RpoD family RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 165.0
  • Bit_score: 313
  • Evalue 3.50e-83

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Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATCCGCATCCCGGTGCACATGATCGAGACCATCAACAAGATGAACCGCATCTCGCGCCAGCACCTGCAGGAGTTCGGTTTCGAGCCCGACGCCGCGCTGCTGGCCGAAAAAATGGAGATCCCCGAGGACAAGATCCGCAAGATCATGAAGATCGCCAAGGAGCCGATCTCGATGGAAACGCCCATCGGGGACGACGACGATTCGCACCTGGGCGATTTCATCGAGGACCAGAACAACACCGCGCCGGTCGATGCCGCCATGCAGGCCGGCCTGCGCGACGTGGTCAAGGACATCCTCGACAGCCTGACGCCGCGCGAGGCCAAGGTGCTGCGCATGCGCTTCGGCATCGAGATGACCAGCGACCACACCCTGGAAGAAGTGGGCAAGCAGTTCGACGTCACGCGCGAGCGCATCCGCCAGATCGAGGCCAAGGCGCTGCGCAAGCTCAAGCACCCCAGCCGCAGCGACAAGCTGCGCAGCTACATCGATTCGCTGTAA
PROTEIN sequence
Length: 166
IRIPVHMIETINKMNRISRQHLQEFGFEPDAALLAEKMEIPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDQNNTAPVDAAMQAGLRDVVKDILDSLTPREAKVLRMRFGIEMTSDHTLEEVGKQFDVTRERIRQIEAKALRKLKHPSRSDKLRSYIDSL*