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SCNpilot_expt_500_bf_scaffold_282_19

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(27958..29151)

Top 3 Functional Annotations

Value Algorithm Source
CoA-transferase family III family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK66_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 386.0
  • Bit_score: 300
  • Evalue 1.80e-78
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EZP52572.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 394.0
  • Bit_score: 473
  • Evalue 3.70e-130
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 400.0
  • Bit_score: 292
  • Evalue 2.60e-76

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGATGCCGCTATCGGGCATTCGCGTGCTGGATTTCACCCATGCCATCGCCGGGCCGACCGCCACGATGACGCTGGCGCAACTGGGGGCCGAGGTCATCAAAATCGAGCCGCCGAAAAAGGGCGACGATTTCCGCCACTACACCGAACATGCAGGATTGCCGGGCATGTCGGTGCCGTTTGCCGCGGTCAATGCGGGCAAGCGCAGTCTGGCGCTGAACCTGAAAGACCCGCGCGGGGTGGCCATTGCGCGCGATCTGGCAGCGCAGGTGGATGTGGTGGCGGAAAATTTCCGCCCCGGCGTGATGGCGCGGCTGGGGCTGGGCTATGAGGCTTTGTCCGCGCTCAATCCGCGCCTGATCTGGCTCTCGCTTTCCGGCTTTGGACAAAGCGGGGATTTGCAGGATCGCGGCGCCTATGACCATATTGCGCAGGCCACATCGGGCATGGCGATGATGAATGCCACCGCCGATGGCCCCTTGAAAATCGGCATTCCGGTGGTGGACAGTTTCACCGGCTATCTGGGCGCGATGGGCGTGCTGGCGGCGCTGCGGCGGCGAGACAGGACCGGCGCGGGCGAGAAGCTGGATGTGGCGATGCTGGATGCCGCGCTCAAGATCATGGGCGCTGCGGCCTCCGTCTGGGACTATACCGGGGCCTCACCCAAGGGGACGGGCAATCGCGGGTTTCGCCTTGTGGCGACGGCGGAATATTATGCCTGCGGCGATGGCTGGATTGCCCTTGGCGCCAATCATCAGCATCAGATCGAGGCGCTGTTCGCCGCACTTGGCGCGCCCGAGATGATCCGCGATCCGCGATTTGCCACCCATGCCGCGAGGGTGGAAAATTACGCCGCGCTCAAGAGCTGGCTGACGCAGGAAATGTTGAAATATTCGGCGCAGGAACTCGATGACCGGTTGACGCAGGCGGGCGTCCCCGCCGCGCGGATCGGCGAGATCGGCGACATTTTGAGCCACCCCCATATGGCGCAGCGCGGGCTGATTTCGCACGCGCAATTGCCGGGGCATGATCGGCCGCTGGCGGTGCTGGGTCTTGGCATGGGGCCGGATTTCTGCGCGCGCGGCGATGCGGGCGCGGTGCCGGTGCTGGGCGCGGATGGCGATGCGGTGCTGGGCGAGATGGGGATGGATGGGGCCACGATTGCGGCCTTACGCGATGCAGGGGTGATCGGATGA
PROTEIN sequence
Length: 398
MMPLSGIRVLDFTHAIAGPTATMTLAQLGAEVIKIEPPKKGDDFRHYTEHAGLPGMSVPFAAVNAGKRSLALNLKDPRGVAIARDLAAQVDVVAENFRPGVMARLGLGYEALSALNPRLIWLSLSGFGQSGDLQDRGAYDHIAQATSGMAMMNATADGPLKIGIPVVDSFTGYLGAMGVLAALRRRDRTGAGEKLDVAMLDAALKIMGAAASVWDYTGASPKGTGNRGFRLVATAEYYACGDGWIALGANHQHQIEALFAALGAPEMIRDPRFATHAARVENYAALKSWLTQEMLKYSAQELDDRLTQAGVPAARIGEIGDILSHPHMAQRGLISHAQLPGHDRPLAVLGLGMGPDFCARGDAGAVPVLGADGDAVLGEMGMDGATIAALRDAGVIG*