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SCNpilot_expt_500_bf_scaffold_282_21

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(30320..32620)

Top 3 Functional Annotations

Value Algorithm Source
2-hydroxyglutaryl-CoA dehydratase D-component n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VDH5_CAUST similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 786.0
  • Bit_score: 712
  • Evalue 5.00e-202
  • rbh
Benzoyl-CoA reductase, bzd-type, O subunit {ECO:0000313|EMBL:EZP52570.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 795.0
  • Bit_score: 834
  • Evalue 1.20e-238
2-hydroxyglutaryl-CoA dehydratase subunit D similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 786.0
  • Bit_score: 712
  • Evalue 1.60e-202
  • rbh

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2301
ATGCTTGCCTTCTTCCATCAGGTCTATGCCGATCCTTTGAGTGCCCCCACCCGCGCGCCGATCATCCGCACGCTGGGGTTCGATGCGCCGCGCGCCGCGCTGCTGGGCGCCGGGTTTCAGCCTGTGCGTCTGGTCGCCCCGCGCCTTGCCGCCACGCCCCGCGCCGATGCCGTGATGGGCCATGCGGCAATGGGCCATCGCGGCAAATGCCTGCTGGAAGTGCTGCTGTCATGGGATGACACGCCGCTGCTGATCACCGCCGCGGATGGCGAACAGCCGCAGATCTTCGCCGCCCTGCGAGAACTGGGGCGGCAGGGGGAAGCAGTGCCCCGGCACATGCATTTCCTCGATTTGCTGCACCTGCCGCGCGCTGCATCCATGGCCTATAATGAGGCGCGCATGGCGCAGATGGGCGACTGGTTGGCGGGGCTTGGCACGGCTCCGGCTGGTGACGCTCATGCTCTGCTCGCCCATCAGGCCCATCTGCTCGACGCGCTGGGCGAGGCGCGGCGGCGGGGCAAGATCAGCGGCGCCGATGCGCTGGCCGTGATCGGCGCCTCGGCTATTCTCCACCCGGCGGATTACAACTCCGCGCTCGAAGAATTGCTGGTGGAACTGGTAGCGGCGCCAGAGATCCCCGGCAAACGCCTGTTCATCACCGGCACCCCGCATGAGGGCCTCGAACTCTATCAGGCCATCGAGGCGGAAGGCTGGCTGATCGTGGGCGAGGATCACGCATGGGGTCAGCCTTTCGCCCATGCCCCCTGCCCGCCGCGCATCGACATGGCGGGGGCCAAGCGGATCGCCTCGGCGGCCACGGCCTGCGGGGCGGATGCTGTGCTGCACCTGTCCATCGGCGGCGATGAGGCCGCGCCATGGCAAGAGGCCGTGATCCGCCGTGCCCTGCCTGATATGGCCTTTACTGCGCTGCGCTGCGATGCCTTGCCCGACGCGCGTTTCCTGCGGGCTTTGCGTGGGCAAGCCGAACCGCCCCGCGCGCCCAAACCGACCCGCGCCGCGCCGCCCAAAGGTGAAAAGCGCAGCCGCAAATCCCTTGAATCCGTCGCCAGTTTCAACGCCTATCAGCGCGAATGGTTTGCCGACCTGCGCGCCAAGGTCGCGGCGGGCAGCCCCTTTGCCATGGCCAATGCCAATGCCCCGCAGGAAATCCTGCGCGCCATGGACATACCCTTTGTCGTCAACCAATGGTGGGCCTCCATCGTCGCGGCCAAACAGCAATCGCGCCGATACCAGACCCTGCTGCGCGAGCATCACTACCCCGCCAATGTCGAGGCCTATTCCGCGCAGGGCATCGCCGCCGCCTTTGATGATGACGCTGAAAACGCGCCTTGGGGCGGATTGCCCCAGCCCGATTTCGTCCATGCTGTCGCTACCAGCGATCCTACCGCGCGCATCTTTGCCGAATGGGCGCAGGTGACGGGCGCGGCGCCCTTCGTCTATGAAAAGAGCAATGATCCGCGCATGGATCTCTATGGCGACTGGTGGGCGCGTCTGCCCGACCGTTGGGAGGAAGCGCTCGAACCCGAACGCATCGACCTGATGACGGCGGAACTGCGCGAGGTGATCGCCACTATCGAGGCCAAGACCGGCCGCCGCTTTGACGAGGCACGGTTTCGCGCTGTGATGGATCTGGTCAATGAGCAGGAGGATTATTACCGCAAGACGCGCGACCTGATCGCCCGGACCGTGCCCGCCCCCATCGGCATTGTCGATTCCATGCCCGCCACGATGGTGCCGCAGTGGCATCGCGGAACAGAATGGGCGCGCGATGCGGCGCTGGCCTTTTATGAAGAGGTCAAGGCGCGGGTCGATGCGGGCCTTGCCGCGTGCCCCGGCGAGAAAGTCCGCCTGATGTGGGTGGGCCGGGGTCTGTGGAGCGAGATGGGCTTCTACCAGAAATGGGAGGAGAGCCATGGCGCGGTCTTTGTCTGGTCGATGTATCTGGCGCTGGCCGCCGATGGCTATATCCGCGATATTGAGGGCAAGGATGCTCTGCGCGCGCTGGCCTCGCGCTGCATCACCATGGGCGATGAGTTGCGCATGCCGACATGGGCCGGACCGTGGTATGTGCATGAGGCGCAGACCCATACGATTGACGGCGTTGTGGCGCTGTCGGACGCCGATCCCTTCGTCGTGCGGGCGCTGCGCGAAGCGGGCTTTCCGGTGCTGGAGCTGACCGCCGACAATTTCAACCGCGAGGGCGAGGATGGCGCGGCCATCGAGGCGGCGATCACCGGCTTTATCGAGGGCGCGGCGGGCCAAAGGGCGGCGCAAAGATGA
PROTEIN sequence
Length: 767
MLAFFHQVYADPLSAPTRAPIIRTLGFDAPRAALLGAGFQPVRLVAPRLAATPRADAVMGHAAMGHRGKCLLEVLLSWDDTPLLITAADGEQPQIFAALRELGRQGEAVPRHMHFLDLLHLPRAASMAYNEARMAQMGDWLAGLGTAPAGDAHALLAHQAHLLDALGEARRRGKISGADALAVIGASAILHPADYNSALEELLVELVAAPEIPGKRLFITGTPHEGLELYQAIEAEGWLIVGEDHAWGQPFAHAPCPPRIDMAGAKRIASAATACGADAVLHLSIGGDEAAPWQEAVIRRALPDMAFTALRCDALPDARFLRALRGQAEPPRAPKPTRAAPPKGEKRSRKSLESVASFNAYQREWFADLRAKVAAGSPFAMANANAPQEILRAMDIPFVVNQWWASIVAAKQQSRRYQTLLREHHYPANVEAYSAQGIAAAFDDDAENAPWGGLPQPDFVHAVATSDPTARIFAEWAQVTGAAPFVYEKSNDPRMDLYGDWWARLPDRWEEALEPERIDLMTAELREVIATIEAKTGRRFDEARFRAVMDLVNEQEDYYRKTRDLIARTVPAPIGIVDSMPATMVPQWHRGTEWARDAALAFYEEVKARVDAGLAACPGEKVRLMWVGRGLWSEMGFYQKWEESHGAVFVWSMYLALAADGYIRDIEGKDALRALASRCITMGDELRMPTWAGPWYVHEAQTHTIDGVVALSDADPFVVRALREAGFPVLELTADNFNREGEDGAAIEAAITGFIEGAAGQRAAQR*