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SCNpilot_expt_500_bf_scaffold_719_26

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 20163..20807

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Sphingobium baderi LL03 RepID=T0G190_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 95.0
  • Bit_score: 66
  • Evalue 3.10e-08
Phosphate regulon transcriptional regulatory protein PhoB {ECO:0000313|EMBL:AKH43944.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.6
  • Coverage: 186.0
  • Bit_score: 69
  • Evalue 6.70e-09

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
GTGTCGGAAAAAATATTGGATGTGTTCACGAATTCGACGGTATTCGGTCGGGATACAATCTGGTTTCAAGATTATGAGTTACGTATTTGCAATTGTGCAGATGCAGCATGTTTTTCCAAGATGTTCGGTAAAATCTGGATCATTTGGAATTCTGCGGTGCAGGGTGATGTTGAAAATATCAATAGTATTATACGCGACCACCCAATCGGCCGGAATGGTCATTTGACCGTTGTAGGGAGGGCAGAAGCAAGTGCCCCTGATAATATACCCTGTGTGCCAAGTCGGGATTTAATGCTTAAGCATTTTGAAAAGTTGTTAGGTTGTGGAATAAATATAGGATACAGTTATATAACTAATATAGAAAAAATATCTATAGATTCTTTGCGGTATAAAATATACTTTGATGGAGTCGACGTAAGGCTAGGGTTGGCCGAGTTTCGCCTTGCTCGATATCTTATTGGCAATGCTAATCGCTTGGTCACTTTTTCCGAGCTGCAATACCTTCTTTATGCTTCTGGATCGTCGCAAAAAAAGATGGCTGTTCAGAAACAGATTTCACGCTTGCGTGAAGCATTATCGACTGCTGGTGCATCAAACCTAATCCGCACAGTGCGAGGTGAAGGCTACGTAATTGATATTATTTGA
PROTEIN sequence
Length: 215
VSEKILDVFTNSTVFGRDTIWFQDYELRICNCADAACFSKMFGKIWIIWNSAVQGDVENINSIIRDHPIGRNGHLTVVGRAEASAPDNIPCVPSRDLMLKHFEKLLGCGINIGYSYITNIEKISIDSLRYKIYFDGVDVRLGLAEFRLARYLIGNANRLVTFSELQYLLYASGSSQKKMAVQKQISRLREALSTAGASNLIRTVRGEGYVIDII*