ggKbase home page

SCNpilot_expt_500_bf_scaffold_53_22

Organism: SCNPILOT_EXPT_1000_BF_Xanthomonadales_66_270

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 27747..29252

Top 3 Functional Annotations

Value Algorithm Source
Polymorphic outer membrane protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B1S2_HERA2 similarity UNIREF
DB: UNIREF100
  • Identity: 27.2
  • Coverage: 434.0
  • Bit_score: 106
  • Evalue 1.10e-19
polymorphic outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 27.2
  • Coverage: 434.0
  • Bit_score: 106
  • Evalue 3.40e-20
Tax=RBG_16_Chloroflexi_47_49_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 26.6
  • Coverage: 518.0
  • Bit_score: 108
  • Evalue 3.00e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Chloroflexi_47_49_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1506
ATGACCGCCTTGCCGCAGCGCCTGCTGTTCGTTCTCGCCGCCGTGTTCACGCTGCCCGCGCCGGCGCAGACCTGGGTGACCAGCGCCGCGTCCTCGGGAACCGGCACCCTGCGTGCGGCGATCCAGGGCCTGAACCCGTCGACCAGCGCGCTGCAGGAGATCCGCTTCGCGATTCCACCCGTGCCCGGCAACCCGGTCGCCGAGATCGTGCTCGACGCTCCGCTGCCGGCCATCAGCGGCGTCAACGTGCTGATCAACGGCAACGGCCCGACCGACCGCGTCGTCGTCAACGGCAACGGCCGGCAGATCTTCACGGTCGAGGAAACCGCGACGACGACCGCGCTGGAGATACGCGATCTGACGTTGCGCGGCGGCGCCGTCGTCAGCAACGGTGGCTGCCTGCGCATACGCCGCGCCGCCACGACGGCCACCTTGCGGCGCGTCGCATTCGATCAGTGCAAGGCCTACGTCAGCGTGATCAACAACCCGGCCGCGCGCGGCGGCGCGGTCTACACCAAGGGCGCGCTGACGATCGAGGACAGCTCGTTCACGGACAACCGCATCGTCAGCACCTCGGCCGACGAAGCCAGCAGTGATGCGGCCGGCGGCGCGCTGTTCGCCGAAGGCGACCGGCCGCTGACGATCGCGCGCTCGCTGTTCACGGGCAACCAGATCTATCTGGGCAACCAGCTGCCGTCGTTCTGCCGCAGCGGCAACGGCGGCGCAATCGCGCTGGCGCTGACCAACGCACTGGCCGTGATCAGCGACACCAGCTTCGTCGACAACAAGGCTTCGTGTCGCAATCCGACCGTGAGCTACGACCTCGACGGCACCGGCGACGGCGGCGCGATCGCAATCTACGGCCAGGGCGGCGAGACGCGCCTGCTCGCTAACTATTTCCACGGCAACTACGGCAGCCGCGGCGGCGCTGTCGGCTTCATGCAGCCGCTGGGCATGCGCGCCACCCTGACCAACAACACCTTCCACGAGAACACCAGCACGCAGGCCGGCGGCGGCGCCGCGCTCATCAACTGCTGCTCGCTCGCGATGATCAACAACACCTTCAGCGGCAACGTCGCGCGCTCGCCGGGACTGGCCAACCAGTTCCAGGCCTGGAGCGACGTGGTCGCGCTGTACAACAACATCTTCGACGGCGCGAACACGAATGCGGACTGCATCATCGGCACTGCCATGACCAACAGCGGCTACAACCTCTATGCGAACAACGCCTGCTGGAGCACCAGCGACGGCAGCAGCCAGATCATCGGCGCGATGACCTGGCTGCAGGCGCCGCGCATCACCGGCGGCTACGTGCCAACCATGCCGTTCGCCAACGGCAGCCCGCCGGTCGATCGCGGCGACGACGCACACTGCGCCGCCTACGACGCGCGCGGCCTGCCGCGGCCGCTGGACGGCAATCTCGACGGCCTCTCGCGCTGCGACATCGGCGCGGTGGAGCACAGCTACGTCGACGTGATTTTCCGCAGCGGGTTTCAGGCGGGTTGA
PROTEIN sequence
Length: 502
MTALPQRLLFVLAAVFTLPAPAQTWVTSAASSGTGTLRAAIQGLNPSTSALQEIRFAIPPVPGNPVAEIVLDAPLPAISGVNVLINGNGPTDRVVVNGNGRQIFTVEETATTTALEIRDLTLRGGAVVSNGGCLRIRRAATTATLRRVAFDQCKAYVSVINNPAARGGAVYTKGALTIEDSSFTDNRIVSTSADEASSDAAGGALFAEGDRPLTIARSLFTGNQIYLGNQLPSFCRSGNGGAIALALTNALAVISDTSFVDNKASCRNPTVSYDLDGTGDGGAIAIYGQGGETRLLANYFHGNYGSRGGAVGFMQPLGMRATLTNNTFHENTSTQAGGGAALINCCSLAMINNTFSGNVARSPGLANQFQAWSDVVALYNNIFDGANTNADCIIGTAMTNSGYNLYANNACWSTSDGSSQIIGAMTWLQAPRITGGYVPTMPFANGSPPVDRGDDAHCAAYDARGLPRPLDGNLDGLSRCDIGAVEHSYVDVIFRSGFQAG*