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SCNpilot_expt_500_bf_scaffold_192_29

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(29160..30356)

Top 3 Functional Annotations

Value Algorithm Source
3-ketoacyl-CoA thiolase (EC:2.3.1.16) similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 398.0
  • Bit_score: 766
  • Evalue 3.70e-219
  • rbh
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:AGU47995.1}; EC=2.3.1.16 {ECO:0000313|EMBL:AGU47995.1};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 398.0
  • Bit_score: 766
  • Evalue 1.60e-218
3-ketoacyl-CoA thiolase n=1 Tax=Variovorax paradoxus B4 RepID=T1X763_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 398.0
  • Bit_score: 766
  • Evalue 1.20e-218
  • rbh

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGAAACAAGTCCAAGACGCCTACATCGTCTCCGCCACCCGCACCCCCATCGGCAAGTCGCACCGCGGCTACTTCCGCAACTACCGCCCCGACGACCTGCTGGCCACCACGCTGCGCGCCGCGCTGGCTGCCGTGCCCAGCCTCGATCCAAAGGCCATCGAAGACATCATCTGCGGCTGCGCGATTCCCGAATCGCAGCAGGGCCTGAACGTCGCGCGCATCGGCGCGGTGCTGGCCGGCCTGCCGACCAGCGTCGGCGGCATCACCGTCAACCGCTTCTGCGCATCGGGCCTGTCGGCCGTGCAGATGGCCGCCGACCGCATCCGCGTCGGCGAGGCCGACGTGATGATCGCTGCCGGCGTCGAGAGCATGAGCATGGTGCCGATGATGGGCAACTCGCCCTCGCTGTCGCCCTCGATCTTCGAGCGCGAAGGTGATGTGGGCATCGCCTACGGCATGGGCCTCACCGCCGAGAAGGTCGCGCAGCAGTGGAAGGTGAGCCGCGAGGCGCAGGACGAGTTCGCGCTCGCCTCGCACCAGAAGGCGCTGGCCGCGCAGAAGGCCGGCAAGTTCGCCGACGAGATCACGCCCATCGAAGTGACCGACCGCACGCCGAACCTCGAGACCGGCGAATCGATCGCCAAGACCCGCACCGTCAACCTCGACGAAGGCGCGCGCCCCGACACCAGCCTCGAAGGCCTGGCCAAGCTGCGCACCGTGTTCGCCGCGCGCGGCACGGTGACGGCCGGCAACAGCTCGCAGACCTCGGACGGCGCCGGCGCGCTGATCCTGGCCAGCGAGAAGGCGGTGAAGCAATACGGCCTCACGCCGCTCGCGCGCTTCGTGAGCTTCGCGAGCAAGGGCGTGCCGCCGCACATCATGGGCATCGGCCCGATCGAGGCGATTCCGGCCGCGCTGCGCTATGCGGGCCTGAAGCACGAGGACATCGACTGGTTCGAACTGAACGAAGCCTTCGCCGCGCAGTCGCTCGCCGTCATCAACACGCTGGGCCTCGATCCGTCGAAGGTCAACCCGATGGGCGGCGCCATCGCGCTGGGCCATCCGCTGGGTGCCACGGGCGCCATCCGCTCGGCCACCGTGGTGCACGCGCTGCGTCGCGAGAACCTGAAGTACGGCATGGTCACGATGTGCGTGGGCATGGGGCAGGGCGCAGCCGGTATTTTCGAAAGGGTCTGA
PROTEIN sequence
Length: 399
MKQVQDAYIVSATRTPIGKSHRGYFRNYRPDDLLATTLRAALAAVPSLDPKAIEDIICGCAIPESQQGLNVARIGAVLAGLPTSVGGITVNRFCASGLSAVQMAADRIRVGEADVMIAAGVESMSMVPMMGNSPSLSPSIFEREGDVGIAYGMGLTAEKVAQQWKVSREAQDEFALASHQKALAAQKAGKFADEITPIEVTDRTPNLETGESIAKTRTVNLDEGARPDTSLEGLAKLRTVFAARGTVTAGNSSQTSDGAGALILASEKAVKQYGLTPLARFVSFASKGVPPHIMGIGPIEAIPAALRYAGLKHEDIDWFELNEAFAAQSLAVINTLGLDPSKVNPMGGAIALGHPLGATGAIRSATVVHALRRENLKYGMVTMCVGMGQGAAGIFERV*