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SCNpilot_expt_500_bf_scaffold_22_24

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(20033..20755)

Top 3 Functional Annotations

Value Algorithm Source
rluF; rrna pseudouridine synthase (EC:5.4.99.-); K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 240.0
  • Bit_score: 430
  • Evalue 3.80e-118
  • rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887, ECO:0000313|EMBL:CBA16535.1};; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 240.0
  • Bit_score: 430
  • Evalue 1.70e-117
Pseudouridine synthase n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2U8W9_XANAP similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 240.0
  • Bit_score: 430
  • Evalue 1.20e-117
  • rbh

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Taxonomy

Xanthomonas albilineans → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGACGACCCGACTCAACAAGCACATCGCCGAATCCGGCTTCTGTTCCCGCCGCGAGGCTGATCGCCTGATCGGCGCCCGCCGCGTGACCGTCAACGGCATCGTGGCCGGTACCGGCGCGGTGGTCGGCGAGGGCGACGAGGTGCGCGTCGATGGCCAGCCGCTGCGCGCGCGCGCGGTGCACAAGGGCACCGGTCGCAGGCATGTCTACATCGCGCTGAACAAACCGGTCGGCATCACCTGCACCACCGAGAGCGCGGTCAAGGGCAACATCGTCGACTTCGTCGGCCATGAGCAGCGCATCTTCCCGATCGGCCGCCTGGACAAGGATTCGGAAGGCCTGATCCTGATGACCAGCAACGGCGACATCGTCAACCAGATCCTGCGCGCCGAGAACGGCCACCAGAAGGAATACCTGGTGGCGGTGAACAAGCCGGTCACCGAGGAATTCCTGCGCGGCATGGCGCGCGGCGTGCGCATCCACGACCAGATGACGCTGCCGTGCCGCACCACGCGCATCGCCAAGTTCGGTTTCCGCATCGTGCTGCAGCAGGGCCTGAACCGGCAGATCCGGCTGATGGCCGCCGCCTTCGGCTACCGCGTCACCCAACTGCGCCGGGTGCGCATCGACAACATCAAGCTGGGCGCGCTCAAGCCCGGGCAGTGGCGCAATCTCACCGAACAGGAGCTGGGCGGCCTGCTGCCGCAGCAACGGGAATGGTGA
PROTEIN sequence
Length: 241
MTTRLNKHIAESGFCSRREADRLIGARRVTVNGIVAGTGAVVGEGDEVRVDGQPLRARAVHKGTGRRHVYIALNKPVGITCTTESAVKGNIVDFVGHEQRIFPIGRLDKDSEGLILMTSNGDIVNQILRAENGHQKEYLVAVNKPVTEEFLRGMARGVRIHDQMTLPCRTTRIAKFGFRIVLQQGLNRQIRLMAAAFGYRVTQLRRVRIDNIKLGALKPGQWRNLTEQELGGLLPQQREW*