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SCNpilot_expt_500_bf_scaffold_212_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 164..1441

Top 3 Functional Annotations

Value Algorithm Source
conjugative transfer protein TrbI n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002FE270F similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 425.0
  • Bit_score: 838
  • Evalue 3.40e-240
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKB27230.1}; TaxID=1073377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila SSU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 425.0
  • Bit_score: 829
  • Evalue 1.70e-237
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 428.0
  • Bit_score: 789
  • Evalue 5.60e-226
  • rbh

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Taxonomy

Aeromonas hydrophila → Aeromonas → Aeromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGAGCCAGGACGACACCCCCGACCTCGCCACGCCGCAGGCAGGCAAGGTCGCGCCGGAAGCGGTGGCGCTGCGCGCCCAGCCGCGCCCGGTCACTCGCCTGAACCGGCGCACGCTGGCCATCCTCGTCGGCGGCCTGTCGGTCGCCGTCCTTGGGGCCACGATCTGGTCGCTGCAACCGCAGCGGCGCGGTACGGGCGAGCAAACCGAGCTTTACAACGTCGATCGCGTCTCGAAGTCCGAAGGGCTGGATGCGCTGCCGACGGACTACTCGAAGCTGCCACCAGCCTTACCGCCCGATGTGCCTGAGCTGGGGCCGCCGTTGCCCGGCGACCTTGGCCCGGCCATCGTCGCTTCGCAGCAGCCGGTGACGCCGGGCTATTCGCCGCCAGGCCATGATCCCGAAGATGCCTTGCGCAAGGAGGCGGACGCGGCGGCGGCCTCGTCGGTGTTCTTCCGCTCGGGCGGCCAAGGGCAGACCGCCGCCACGGTCGCGCAGGCAGCGCCGGGGGCTGCAAGTACGTTTGCGGCCTTCGATCCGCTCGCTGCTGGGCCTGCCTCGACGGCGGCCCAGCCCGCCGACCCGACCGCCGTGCAGAACCGGCAAGACCAGAAAGAGTCGTTCCTGAAAGCCGGTTCTACGGAAACCCGCAATTCCGGCAATCTGGCGCTGCCCGCGTCGCCGTATCAGGTGATGGCCGGAACGGTGATCGCCGGTGCGCTGGTGACAGGCATCAAGTCGGACTTGCCGGGCGACGTGATCGGCACTGTGACGGAGCCGGTCTATGACACAGCCACCGGCAAGTTCCTGCTGATTCCGCAGGGGTCGCGCATCCTCGGGCGCTACAACAGCCAGGTCAGCTACGGACAGAGCCGCGTGCAGGTGGTGTGGAACCGGATCATCCTGCCCGACACGTCGTCGCTGACGCTCGACAACCTTGTCGGCACCGACCCGGCCGGCTACGCGGGCTTGGAGGATGACGTGGACTGGCACTGGAACCGCATCTTTGCCGGAGCGGTGCTGACGACGCTGCTGGGCGTCGGCGCAGAGCTGGCCGCGCCAGAGAACCGCCAGGACGGCAACCGGATCGTCATTGCCGGGCGTGACAGCGCCCAGGACAGCATCAATCAGGTTGGCCAGGAGATCACCCGACGCAACATGAACATCCAGCCGACGCTGACCGAGCGGCCTGGCCTGCCCGTGCGAATCATCGTCAACCGGGATCTGGTGCTGCGGCCGTACCAGCCGCTGTTCTTCAATCGGGGAGCTTCGCAATGA
PROTEIN sequence
Length: 426
MSQDDTPDLATPQAGKVAPEAVALRAQPRPVTRLNRRTLAILVGGLSVAVLGATIWSLQPQRRGTGEQTELYNVDRVSKSEGLDALPTDYSKLPPALPPDVPELGPPLPGDLGPAIVASQQPVTPGYSPPGHDPEDALRKEADAAAASSVFFRSGGQGQTAATVAQAAPGAASTFAAFDPLAAGPASTAAQPADPTAVQNRQDQKESFLKAGSTETRNSGNLALPASPYQVMAGTVIAGALVTGIKSDLPGDVIGTVTEPVYDTATGKFLLIPQGSRILGRYNSQVSYGQSRVQVVWNRIILPDTSSLTLDNLVGTDPAGYAGLEDDVDWHWNRIFAGAVLTTLLGVGAELAAPENRQDGNRIVIAGRDSAQDSINQVGQEITRRNMNIQPTLTERPGLPVRIIVNRDLVLRPYQPLFFNRGASQ*