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SCNpilot_expt_500_bf_scaffold_1546_11

Organism: SCNPILOT_EXPT_300_BF_Burkholderiales_66_26

near complete RP 51 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(12723..12920)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 60.0
  • Bit_score: 109
  • Evalue 4.00e-22
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (strain CNB-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 60.0
  • Bit_score: 109
  • Evalue 1.80e-21
DNA-directed RNA polymerase subunit beta' n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KUW8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 60.0
  • Bit_score: 109
  • Evalue 1.30e-21

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 198
ATGAAATCGCTACTCGACCTGTTCAAGCAGTTCACGCCCGATGAGCATTTCGACGCCATCAAGATCGGCCTGGCGTCGCCCGAGAAAATCCGTTCCTGGTCCTTCGGCGAGGTCAAGAAGCCCGAGACCATTAACTACCGCACCTTCAAGCCCCGATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTGA
PROTEIN sequence
Length: 66
MKSLLDLFKQFTPDEHFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPRSRTTSACAASTSA*