ggKbase home page

SCNpilot_expt_500_bf_scaffold_152_9

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 51 / 55 BSCG 50 / 51 MC: 1 ASCG 12 / 38
Location: comp(6298..7194)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2W3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 258.0
  • Bit_score: 171
  • Evalue 1.20e-39
Uncharacterized protein {ECO:0000313|EMBL:KGM31842.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 258.0
  • Bit_score: 210
  • Evalue 4.40e-51
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 31.8
  • Coverage: 296.0
  • Bit_score: 140
  • Evalue 9.60e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGAGCCGCGGACAAGGCGACAGGCTTCCAAAAACGGATGCGCCGCTTGCAGGATCGTCGCGCCACGGACGTGACGGGCAGGTGCCCGCGCAGGCCGGGTCCGCGGCCAGCCGCCAGCGCGTCGAGCTTGCGCAATACGAGGAGGATCTGGCGGGCCGCGTGGACTGGACCATAGATGCGCCGCGCCACACCATCGTCGTCCACGAGCGCGGCCGCATCGACCGCCTGCGTACCCGCATCGCCGGGCACACGCACCAGTTCAGGCCGCCGCTGCCGGGCGACCTGTGGTTCATTCCCGCCGGCGAGCGCTACCGCGCCACCGCGCAGGGCGGCGTGATCCGCTATTCCGAATTGCGCGTGGAACCGCTCGCGCTGCACGAGGCCGGCGCCCGCCTGCCGCTACCGGTGCGCCAGGCGCATCGCGACGAGATGCTTTACCGCATGGTGCTGCAGCTGGGCGAGCTGGCCGGCGCCCGCGACGATCTCTCACTGCTGCTCGCCGACAGCCTGCGCAGCAGCCTGGTGCTGCACCTGGCCCGGCTCGCCGCGGCGCCGCGGGAGTCCGCGATCGCGCGCGAAGGCCTGGACGCCGCGTCGCGGCGGCGCCTCGAGGACTACATCGACGCGCATCTGGACCGCCGCATCGCGCTGGCCGACCTGGCCGCCGTCGCCGGCCTGCGGCGGCATGGACTGCCCGCCGCGTTCAGGCACAGCTTCGGCGCCACGCCGCTGCAATACGTGATCGCCCGCCGCCTGCAGCGCGCCTGCATGCTGCTGCGCGAAACCCGCCGCCCCATCGCCGACATCGCCCAGGATTGCGGCTTCTTCAGCCACAGCCACATGACCGGCATGTTTCGCCGCCACCTGGGCGTGGTGCCCAGCGCCGTGCGCGGCTGA
PROTEIN sequence
Length: 299
MSRGQGDRLPKTDAPLAGSSRHGRDGQVPAQAGSAASRQRVELAQYEEDLAGRVDWTIDAPRHTIVVHERGRIDRLRTRIAGHTHQFRPPLPGDLWFIPAGERYRATAQGGVIRYSELRVEPLALHEAGARLPLPVRQAHRDEMLYRMVLQLGELAGARDDLSLLLADSLRSSLVLHLARLAAAPRESAIAREGLDAASRRRLEDYIDAHLDRRIALADLAAVAGLRRHGLPAAFRHSFGATPLQYVIARRLQRACMLLRETRRPIADIAQDCGFFSHSHMTGMFRRHLGVVPSAVRG*