ggKbase home page

SCNpilot_expt_500_bf_scaffold_52_30

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 32637..33701

Top 3 Functional Annotations

Value Algorithm Source
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 352.0
  • Bit_score: 610
  • Evalue 1.30e-171
dTDP-glucose 4,6-dehydratase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IVU6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 355.0
  • Bit_score: 588
  • Evalue 3.90e-165
rmlB; dTDP-glucose 4,6-dehydratase similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 354.0
  • Bit_score: 577
  • Evalue 2.80e-162

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
ATGCTTCTGGTAACTGGCGGGGCGGGCTTCATCGGCGCCAATTTTATTCTGGATTGGCTGGCGCAAGCTGACGAAGCAATCATCAATCTGGACAAACTGACGTATGCTGGCAATCTGGAGAACCTTGCGGCACTGGCTGCGGACGAACGCCATATCTTCGTGCATGGGGATGTCTGCGATACAGCGCTGGTAAGCAGCGTGCTCGGTCGCTACAAGCCTCGCGCCATTCTCAATTTTGCGGCGGAAAGCCACGTGGATCGATCCATTCACGGCCCGGAAGAGTTCGTGCAGACCAATATACTCGGTACTTTTCGATTATTGGAGGCAAGCCGGGCATACTGGAATGGTTTGAATGACAAAATGAAACGCCGTTTTCGCTTTCTCCATGTTTCCACCGATGAGGTTTACGGGTCTCTGGTACAGGGCCAGCCCGCTTTTTCCGAGACTTTTCCTTACCAGCCTAACAGTCCTTATTCAGCCAGCAAGGCTGCCAGCGATCATCTCGTTCGAGCTTATTATCATACCTATGGTTTGCCTGTACTCACTACCAATTGCTCCAATAACTATGGTCCTTACCAGTTTCCCGAGAAACTCATTCCACTGATGGTCGTAAACGCGCTAGCAGGAAAGCCGCTGCCCGTTTATGGAGATGGCCAGCAAATTCGGGACTGGCTGTATGTAAAAGATCACTGCACGGCTATTCGCCGCGTGCTTGAAGCCGGCGTTGTCGGCGAAACCTATAATGTAGGCGGCTGGAACGAGCAGCCGAATATAAAAATTGTCAGAACGATCTGTACATTATTGGATACATTAAGGCCCTTGGTTATCGGCTCCTACCATAGCCTGATCACCTTCGTTTCGGATCGTCCCGGCCATGACCGGCGCTATGCGATCGATGCAAGCAAGATCGAACGCGAGTTGGGCTGGAAGCCGGGGGAGACATTTGAAACAGGGGTGACCAAAACCCTTCGTTGGTATCTCGATAATCCTGCCTGGATCGGCAATGTGCAGTCAGGGGCTTACAGGACCTGGATGGAAAAGAATTACGCCGGACGCCAGGCATGA
PROTEIN sequence
Length: 355
MLLVTGGAGFIGANFILDWLAQADEAIINLDKLTYAGNLENLAALAADERHIFVHGDVCDTALVSSVLGRYKPRAILNFAAESHVDRSIHGPEEFVQTNILGTFRLLEASRAYWNGLNDKMKRRFRFLHVSTDEVYGSLVQGQPAFSETFPYQPNSPYSASKAASDHLVRAYYHTYGLPVLTTNCSNNYGPYQFPEKLIPLMVVNALAGKPLPVYGDGQQIRDWLYVKDHCTAIRRVLEAGVVGETYNVGGWNEQPNIKIVRTICTLLDTLRPLVIGSYHSLITFVSDRPGHDRRYAIDASKIERELGWKPGETFETGVTKTLRWYLDNPAWIGNVQSGAYRTWMEKNYAGRQA*