ggKbase home page

SCNpilot_expt_500_bf_scaffold_144_18

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(24579..25304)

Top 3 Functional Annotations

Value Algorithm Source
putative Prolyl 4-hydroxylase alpha subunit (EC:1.14.11.2) similarity KEGG
DB: KEGG
  • Identity: 29.2
  • Coverage: 236.0
  • Bit_score: 96
  • Evalue 1.70e-17
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003748EC3 similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 207.0
  • Bit_score: 188
  • Evalue 6.10e-45
Uncharacterized protein {ECO:0000313|EMBL:EZH75783.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 203.0
  • Bit_score: 179
  • Evalue 5.20e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Aquimarina atlantica → Aquimarina → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 726
ATGCCTCTCACCGCATCGCTCTGTCTCGCGCCGGCTTCCCGTCCGCCTGCGCCCGCGCATTGGCTGTCTCCGCCAGATGAATCCGGATCGGGTGCGAAGAAAATCTCCGGAAGACAAATAGCAGACATCCTGAAGAAACCTTTGACAAGCGAGGTCTTCCTGATCGATCATTTTCTTTCCCATGAGGAATGCGATCAGATATTGGAAGAGCTGCGATTCGCCATATGGCGCCCGAGCCTGACATACATGCTACAGCAGGATGGCACTCGGCGCGATGTATTGAGTCCCTACAGGGTAAGCAAGACCGCGCAGCAGAAATGGTTCAGCGACGAATTGCAGGCCATGGTGGCGGCGATCGAAAGGCGTTTCGGGGAAATGTTCGGGCTCGAAAAAGCTAACCTGGAGTATTGGCAGGGTACCGACTATCCGATAGGCGGAAGCTTTTACTATCATCTCGATTCAGGATATTGGGAAGACCACTACGCGGGCGACCGCATCCTGACCCTGTTGCTGTATCTCACCACTCCGCCGGAAGGCGGCGGCACCCATTTCCGCGCGCTCGATAGAACGGTAGAAGCAAAAACAGGCAGGCTGGTAGTATGGAGCAACCTGTTTCCGAACGGGAAATGCAACCATCGGATGATCCATTCCAGCGTGCCCCTGGTCGAAGGACGGAAAACGACATTGATCACTTGGCTTAGGCAAAAACAATTCAGGTTTTTTTAA
PROTEIN sequence
Length: 242
MPLTASLCLAPASRPPAPAHWLSPPDESGSGAKKISGRQIADILKKPLTSEVFLIDHFLSHEECDQILEELRFAIWRPSLTYMLQQDGTRRDVLSPYRVSKTAQQKWFSDELQAMVAAIERRFGEMFGLEKANLEYWQGTDYPIGGSFYYHLDSGYWEDHYAGDRILTLLLYLTTPPEGGGTHFRALDRTVEAKTGRLVVWSNLFPNGKCNHRMIHSSVPLVEGRKTTLITWLRQKQFRFF*