ggKbase home page

SCNpilot_expt_500_bf_scaffold_521_27

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(26719..27081)

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase hydrophobic membrane anchor protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIS8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 120.0
  • Bit_score: 175
  • Evalue 4.50e-41
Succinate dehydrogenase hydrophobic membrane anchor protein {ECO:0000313|EMBL:CCU62542.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 120.0
  • Bit_score: 175
  • Evalue 6.40e-41
succinate dehydrogenase, cytochrome b subunit; K00242 succinate dehydrogenase membrane anchor subunit similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 116.0
  • Bit_score: 151
  • Evalue 1.70e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGGTGAAACGAGCATTGACTGGCGCGCATTATGGCCTGTTCGACTGGCTGGCTCAGCGCATCACTGCATTCGTAATGATTGTTTTCGTCCTGTATGCGGCGGCCGCATGGCTGTTTTCGGCGCCGCACGGCCATGACGGATGGAAAACGATATTCGGTTACAGCGGCATGCGGATAGGCGCTTTCCTGTTTCTCGTCAGCCTTTTCTGGCATGCATGGGTCGGGATTCGCAACATCCTGATGGATTATGTGCATGCCACTGCCATCCGGCTGGCGTTGCAGGTACTGGCTATCCTCTCATTGCTGTTTTATGCCATCTGGTCCGCTGAAATCCTCTGGGCTCCGGGAACTTCGTGGCGATAG
PROTEIN sequence
Length: 121
MVKRALTGAHYGLFDWLAQRITAFVMIVFVLYAAAAWLFSAPHGHDGWKTIFGYSGMRIGAFLFLVSLFWHAWVGIRNILMDYVHATAIRLALQVLAILSLLFYAIWSAEILWAPGTSWR*