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SCNpilot_expt_500_bf_scaffold_1380_15

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 11530..12006

Top 3 Functional Annotations

Value Algorithm Source
single-strand binding protein; K03111 single-strand DNA-binding protein id=12498476 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 324
  • Evalue 4.70e-86
  • rbh
single-strand binding protein; K03111 single-strand DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 161.0
  • Bit_score: 265
  • Evalue 1.10e-68
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 162.0
  • Bit_score: 278
  • Evalue 7.00e-72

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGGCATCCGTCAATAAAGTCATTCTGGTCGGCAATCTCGGGCGCGATCCCGAAATGCGCTACTTGCCGAGCGGCGAGGCCGTGGTCAACCTGAGCGTGGCGACTACCGACAAGTACAAGGACAAGAGCGGCGCCATGCAGGAAGCGACCGAATGGCACCGCGTCAGTTTCTTCGGCCGCACGGCCGAGGTCTGTGGGCAATACCTCAAAAAGGGCAGCCAGGTCTACGTCGAGGGCAGCATCCGTACCCGCAAGTACACCGATAAGGATGGGGTCGAGAAATACGCCACCGAAATCCGCGGTGACCGTATGCAGATGCTGGGCGGACGTGCCGGCGGTGGCATGGCGGACATGGATGACGGCGGCTACAACCAGGCGCCGCCGCCGCGCAGCCCGTCGGGCGGCCAGCGCAGCGTGCCGGCGGCGCGGCCGGCTTCCAGCGGTTTCGATGACATGGACGACGACATTCCGTTCTGA
PROTEIN sequence
Length: 159
MASVNKVILVGNLGRDPEMRYLPSGEAVVNLSVATTDKYKDKSGAMQEATEWHRVSFFGRTAEVCGQYLKKGSQVYVEGSIRTRKYTDKDGVEKYATEIRGDRMQMLGGRAGGGMADMDDGGYNQAPPPRSPSGGQRSVPAARPASSGFDDMDDDIPF*