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SCNpilot_expt_500_bf_scaffold_3235_14

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(11125..11598)

Top 3 Functional Annotations

Value Algorithm Source
P-type conjugative transfer protein TrbG n=11 Tax=Pseudomonas aeruginosa RepID=U8CE56_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 157.0
  • Bit_score: 317
  • Evalue 9.70e-84
Conjugative transfer protein TrbG {ECO:0000313|EMBL:ETD47588.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 157.0
  • Bit_score: 317
  • Evalue 1.40e-83
P-type conjugative transfer protein TrbG similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 157.0
  • Bit_score: 307
  • Evalue 3.10e-81

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
AAGACCAATCTCGTCATCACCACCAACCGCAGGACGTACCTGCTGGAGTTGGCTTCGACGGAAAAGACGTGGATGGCATCGGTATCTTGGGAGTACCCGCGCGACCGGATGCTGGCCTTGCAACGCCAGGCGCAGGCGGCCAGCGCCGCAGCGCCGGTCGATAGCGGGCTGTCGCTGGAGAACCTGCGTTTCCGCTACGCGATCAGCGGCAGCAATCCGCCTTGGAAGCCGCTGCGCGCCTTCGATGACGGCGAGAAGGTTTATATCCAGTTCCCGGCGGGCATCGCACAAGGTGAGCTGCCGCCGCTGTTCGTCATCGGCACGCAGGGCGACGGACAACTCGTGAACTACCGCTTCCGCTCGCCGTATTACATCGTCGATCGCCTGTTCGGTGCCGCCGAGCTGCGCCTAGGCGCTGACAAGGGCGACGTGGTGCGGATCGAGCGCACGGACGGCGTTACACGGAGGAACTGA
PROTEIN sequence
Length: 158
KTNLVITTNRRTYLLELASTEKTWMASVSWEYPRDRMLALQRQAQAASAAAPVDSGLSLENLRFRYAISGSNPPWKPLRAFDDGEKVYIQFPAGIAQGELPPLFVIGTQGDGQLVNYRFRSPYYIVDRLFGAAELRLGADKGDVVRIERTDGVTRRN*