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SCNpilot_expt_500_bf_scaffold_1535_6

Organism: scnpilot_expt_500_bf_thiobacillus1

near complete RP 49 / 55 MC: 4 BSCG 49 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: 5538..6872

Top 3 Functional Annotations

Value Algorithm Source
Hrp-dependent type III effector protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003722487 similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 444.0
  • Bit_score: 840
  • Evalue 7.10e-241
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 444.0
  • Bit_score: 698
  • Evalue 1.00e-198
  • rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 444.0
  • Bit_score: 842
  • Evalue 2.60e-241

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1335
ATGAGCCCCAAGATCGTCGTTCTCGACGACGATCCCACCGGCTCGCAGACGGTGCATTCCTGTCTGCTGCTGACGCGCTGGGATGTCTCCACGCTGAAGACGGCGCTGGCCGATGCGGCGCCGCTGTTCTTCATCCTCACCAATACGCGCGGGATGGATGCGGAACGCGCGGCCACCGTGACGCGCGAGGTGTGTGAAAACCTCAGGCTCGCGCTCGCCGATTTCCCCGGACCGGTCCTGTTCGTGTCCCGCTCGGATTCCACCCTGCGCGGCCACTACCCGGTGGAGACCGACGTGATGAACGCCGTGCTCGGACCGTTCGACGCGACGCTGCTGACGCCGGCTTTTTTCGAAGGCGGCCGCATCACGCGGGACAGCACGCATTACCTGATGGTCGACGGCAAACCGGTGCCGACCCATGAGACCGAGTTCGCGCGCGACTCGGTGTTCGGCTATCGCACGGCGTATCTGCCGGACTATGTCGCCGAGAAGACAAATGGTCGCGTGGCATCCGATTCGGTACGGCGCCTGACGCTGGCCGATCTGCGCACAGGACAGGCGGACACCTGGCTGGCGGCGCTGAACGATAATCAAGTGGGGGTGATCGACGGCGAAACGACGGACGACTACCGGCTGTTCGCCGACGCTGCGCTGAAGGCCGCGGCCGGCGGCAAGCGATGGCTGTTCCGCAGCGCCGCTTCGCTGCTCACCGCGTTGGCGAAGCTGCCACCGCAGCCGGTGGCCGCCGAAGCCTTTTCCACCCTGGTGCGCGACCGTCAGCCTGGCGCGGTCGTGGTCGGCTCGCACGTCGCCAAGACCACCGCACAACTCACCGCGTTGCTGAAGGAGCGCGGCGTGGTCGGTCTGCCGCTCGACGTTGCCCGCCTGCCCGACGCGCGCGCCGCGGTGGTCGACGAACTCACCGCCGGCATCGCCCACGCCCACGCACGGGGCCTCACCCCGGTGGTGTTCACCAGCCGTAGCGAGCGGCAATTCGCCAACATTGTAGAGCGCCTGGCGTTCGGCGAGTCGGTGTCGGGCACGCTGATGGACGTGGTGAAACGACTGCCGGACACGCTCGGCTTTCTCATCAGCAAGGGCGGCATCACCTCCAACGACGTACTGTCGACCGGGCTGGCGCTGACCGCCTCGCGCGTGCTGGGGCAGATCCTACCCGGCGTCACCGTGGTGCAGACGCCGCCCGACCACCGCTTGCCGCAGTTGCCGGTCGTCATCTTTCCCGGCAATGTCGGCGGCGACGGCGCGCTGGCGGAGGCCTATCGACGACTCGCACCCTCGCACGCGCAGGCAAGCCCGGCTACACTCGCAGCCTGA
PROTEIN sequence
Length: 445
MSPKIVVLDDDPTGSQTVHSCLLLTRWDVSTLKTALADAAPLFFILTNTRGMDAERAATVTREVCENLRLALADFPGPVLFVSRSDSTLRGHYPVETDVMNAVLGPFDATLLTPAFFEGGRITRDSTHYLMVDGKPVPTHETEFARDSVFGYRTAYLPDYVAEKTNGRVASDSVRRLTLADLRTGQADTWLAALNDNQVGVIDGETTDDYRLFADAALKAAAGGKRWLFRSAASLLTALAKLPPQPVAAEAFSTLVRDRQPGAVVVGSHVAKTTAQLTALLKERGVVGLPLDVARLPDARAAVVDELTAGIAHAHARGLTPVVFTSRSERQFANIVERLAFGESVSGTLMDVVKRLPDTLGFLISKGGITSNDVLSTGLALTASRVLGQILPGVTVVQTPPDHRLPQLPVVIFPGNVGGDGALAEAYRRLAPSHAQASPATLAA*