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SCNpilot_expt_500_bf_scaffold_1535_16

Organism: scnpilot_expt_500_bf_thiobacillus1

near complete RP 49 / 55 MC: 4 BSCG 49 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: comp(15678..16937)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 419.0
  • Bit_score: 807
  • Evalue 8.80e-231
transcription termination factor Rho n=1 Tax=Thiobacillus thioparus RepID=UPI00037BECBE similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 419.0
  • Bit_score: 819
  • Evalue 1.60e-234
  • rbh
rho; transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 419.0
  • Bit_score: 807
  • Evalue 2.00e-231
  • rbh

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGCATCTTTCCGAACTCAAGCAGAAACCCATTACCGAGCTTCTCGAGCTTGCCGCCGCCAACGGTATCGACAACGCCAACCGTTTTCGCAAGCAGGAACTGATCTTCACCATCCTGAAAACCCTGGCCAAGCGCGGCGAGAGCATCTACGGCGACGGTGTGCTGGAAGTGCTGCCGGACGGTTTCGGGTTCCTGAGATCGCCGGAGTCCTCGTACCTCGCCAACACCGACGACATCTACGTGTCGCCGTCGCAGATCCGCCGCTTCAACCTGCATACCGGCGACAAGATCGAAGGCGAGATCCGTACGCCGAAGGACGGCGAGCGCTATTCGGCGATGACCAAGCTTGACCTGATCAACGGCGAGCCGCCCGAAGCCAGCAAGAACAAGATCCTGTTCGAGAACCTGACGCCGCTGCACCCGGACAAGCCGCTCAAGCTGGAGCGCGACATCAAGGCCGAGGAAAACATCACCAGCCGCGTGATCGACATCGTCGCGCCGATCGGCAAGGGCCAGCGCGGCCTCCTGGTGGCGCCGCCGAAATCCGGCAAGACGGTGATGCTGCAGCACATCGCGCACGCCATCACGTCCAACCATCCCGACGTCGTGCTGTTCGTGCTGCTGATCGACGAGCGTCCGGAAGAAGTGACCGAGATGAGCCGTACCGTGCGCGGCGAGGTCGTGGCATCGACCTTTGACGAACCCGCCAGCCGGCATGTGCAAGTGGCCGAAATGGTGATCGAGCGCGCCAAGCGTCTGGTCGAGCACAAGAAGGACGTGGTGATCCTGCTCGATTCGATCACCCGTCTGGCCCGTGCTTACAACACCGTGCAGCCGGCCTCCGGCAAGGTACTCACCGGCGGCGTCGACGCCAACGCGTTGCAGAAGCCCAAGCGCTTCTTCGGTGCGGCGCGCAACATCGAGGAAGGCGGCAGCCTTACCATCCTCGCCACCACGCTGGTCGACACCGGCAGCCGCATGGACGACGTGATCTACGAGGAATTCAAGGGTACCGGCAACCTGGAAATCCACCTCGACCGCAAGATGGCCGAGAAGCGCCAGTATCCCGCGATCAACGTCAACCGCTCCGGCACCCGCCGCGAGGAGCTCCTGATGCCGCATGACATCCTGCAAAAGGTGTGGGTGCTCAGGAAGCTGCTGTACCCGATGGACGACATGGAGGCGATGGAATTCCTGCTCGACAAGATCCGTGCGACGAAGAACAACAACGAGTTCTTCGATTCGATGCGGCGCGGCTGA
PROTEIN sequence
Length: 420
MHLSELKQKPITELLELAAANGIDNANRFRKQELIFTILKTLAKRGESIYGDGVLEVLPDGFGFLRSPESSYLANTDDIYVSPSQIRRFNLHTGDKIEGEIRTPKDGERYSAMTKLDLINGEPPEASKNKILFENLTPLHPDKPLKLERDIKAEENITSRVIDIVAPIGKGQRGLLVAPPKSGKTVMLQHIAHAITSNHPDVVLFVLLIDERPEEVTEMSRTVRGEVVASTFDEPASRHVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNTVQPASGKVLTGGVDANALQKPKRFFGAARNIEEGGSLTILATTLVDTGSRMDDVIYEEFKGTGNLEIHLDRKMAEKRQYPAINVNRSGTRREELLMPHDILQKVWVLRKLLYPMDDMEAMEFLLDKIRATKNNNEFFDSMRRG*