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SCNpilot_expt_500_bf_scaffold_2662_2

Organism: scnpilot_expt_500_bf_thiobacillus1

near complete RP 49 / 55 MC: 4 BSCG 49 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: 1379..2326

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB id=12498616 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 316.0
  • Bit_score: 525
  • Evalue 4.70e-146
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 318.0
  • Bit_score: 458
  • Evalue 2.20e-126
Secretion protein HlyD {ECO:0000313|EMBL:AAZ97287.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 318.0
  • Bit_score: 458
  • Evalue 9.90e-126

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
GTGGGCGACGCGCCGCTGGAAGATGCGGCGCGCGAGCGAATGCTGCTGGGCGGCATGCCCGAAAGTCTGATACGGGCAGTGGTTCAAACCGGCAAGGTCAGAAATCGCATATCGATCACCGCCCCGCGTGCCGGCGTGATCCAGACGCTCGACGTGCGCCCCGGCATGACGCTGATGGCGGGACAGACGCTGGCACGCGTCAACGGCATCAGCACGGTGTGGCTCGATGTGTCGGTGCCGGAAGCCCAGGCCGGGGCCGTTCTGATCGGGCAATCCGCCGAAGCAAAATTTGCCGCCTTTCCGGGCAAGCCGGTACAGGGTCGTGTCACTGCGTTATTGCCGACATTGAACGATGCCGCGCGTGCGCTCAGGGTTCGGGTTGAACTACCCAACAAGGACGGACGCCTGCGGCCGGGCTTGACGGCCCAGGTCAGCCTCAAAGGAGCGGTCGGCGAATCGGCGCTGCTAGTGCCGACCGAAGCGGTGATCCGCACCGGACGCCGCGCGCTGGTCATCGTGGCCGAAGCAGAAGGACGCTATCGCCCGGTCGAGGTCGTCCTTGGCCCCGAGTCCGGTACCGACACGGTGATTGTGTCCGGTCTCGGCGAAGGCCAGAAAATCGTCGCCAGCGGCCAGTTTCTGATTGATTCAGAAGCGAGTCTGCAGGGGATTATCTCAAGCACTTCCGAGTCGGCCGAAGCGATGCCGGCACCGGTTGCGCTACACGAAGCCGATGCCGTCATCAAGGAATTGTCCGGCACGAGCGTGACGCTCGCGCACGGCCCCTTCAAGACGCTATCGATGCCCGGCATGACCATGGCGTTCCCGCTTGCCAATCCCCAACTCGCCAAGGGTCTGAAGGTGGGGGATCGGGTGCGCGTCGGCGTGCGCCAGACCGACGACGGGCTGGTCGTCGAACGCATCGAGCGGGCAGGAGGCGGGCAATGA
PROTEIN sequence
Length: 316
VGDAPLEDAARERMLLGGMPESLIRAVVQTGKVRNRISITAPRAGVIQTLDVRPGMTLMAGQTLARVNGISTVWLDVSVPEAQAGAVLIGQSAEAKFAAFPGKPVQGRVTALLPTLNDAARALRVRVELPNKDGRLRPGLTAQVSLKGAVGESALLVPTEAVIRTGRRALVIVAEAEGRYRPVEVVLGPESGTDTVIVSGLGEGQKIVASGQFLIDSEASLQGIISSTSESAEAMPAPVALHEADAVIKELSGTSVTLAHGPFKTLSMPGMTMAFPLANPQLAKGLKVGDRVRVGVRQTDDGLVVERIERAGGGQ*