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SCNpilot_expt_500_bf_scaffold_3718_4

Organism: scnpilot_expt_500_bf_thiobacillus1

near complete RP 49 / 55 MC: 4 BSCG 49 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: 903..1478

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TraF n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IL24_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 199.0
  • Bit_score: 339
  • Evalue 2.20e-90
  • rbh
traF1; conjugal transfer protein TraF similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 199.0
  • Bit_score: 339
  • Evalue 7.00e-91
  • rbh
Conjugal transfer protein TraF {ECO:0000313|EMBL:CAP42530.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 199.0
  • Bit_score: 339
  • Evalue 3.10e-90

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Taxonomy

Bordetella petrii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGACCGCCGTTTCCACTGGTGGCACTGCACCGCTTCTACGCTCGCACGCCCGCTCCCGCTTGCGCGCTCGCATCGTGCTCGCGGGCTTCGCCGCCTGCGGCCTCGCTGCGCTGGCCTGGGCGTCCTTCGTGCATCCGCTGCCCCGCTCAATCTACAACCCGTCCGACAGCGTGGCGGTCGGCTGGTATCGCATCGCGCCACCCGATGCGCCGCGCGTCGGCTCCATCGTGTTGACCACGCTGCCGCCAGATGCCGCCGCGCTGGCCGCGCAGCGCGGCTACCTGCCGGCGCGCGTGCCGCTGCTCAAGCGCGTGGGCGCGACCGCGCCGCAGCACGTTTGCGTCTTCGATGCGCTGGTGTGGATCGACGGCGTGCCGGTGGCCGCCGTGCGGCCCGCCGACCGGCTGGGCCGTCCGCTGCCATCCTGGCAGCAGTGCCGGCAGCTTCGGCCCGGCGAGCTGTTCCTGCTCAGTTCGACCAATCCGGCGTCATTCGACAGCCGGTATTTCGGGCCGATCAGCGCATCCGCCGTGATCGGCATCGCGCATCCGGTCTGGCTGGAGAAGCGCCCATGA
PROTEIN sequence
Length: 192
MTAVSTGGTAPLLRSHARSRLRARIVLAGFAACGLAALAWASFVHPLPRSIYNPSDSVAVGWYRIAPPDAPRVGSIVLTTLPPDAAALAAQRGYLPARVPLLKRVGATAPQHVCVFDALVWIDGVPVAAVRPADRLGRPLPSWQQCRQLRPGELFLLSSTNPASFDSRYFGPISASAVIGIAHPVWLEKRP*