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SCNpilot_expt_500_bf_scaffold_3478_1

Organism: scnpilot_expt_500_bf_thiobacillus1

near complete RP 49 / 55 MC: 4 BSCG 49 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: 3..377

Top 3 Functional Annotations

Value Algorithm Source
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 124.0
  • Bit_score: 214
  • Evalue 1.70e-53
Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02004}; EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02004};; Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02004}; Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02004};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 124.0
  • Bit_score: 214
  • Evalue 7.50e-53
valyl-tRNA synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00036B0708 similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 124.0
  • Bit_score: 221
  • Evalue 4.40e-55

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
GCCCAGCGCGTACCGCTCGTAATCGAAGGCGATGCCACCGTGATCAACGCGCTGGCCCCCTACATTGTTGCGCTGGGTAAACTTAGCGAAGTCAGCGCGGTGGCCGCGCTGCCGGAAGCCGACGCCCCTGTCGCGCTGATCGGTGACATGCGACTAATGCTGGTGGTGGAAATCGACAAGGACGAAGAACGCGCCCGCCTCGCCAAGGAAATCGCCCGCATCCAGGGCGAAATCAAGAAAGCCGAAACCAAACTTGCCAACCCCAGTTTCGTCGACAAGGCTCCCGCTGCTGTGGTGCAGCAGGAGCAGGCCCGGCTGGCCGACTTTGCATCCATGCTGCAGAAGCTGGCGGCGCAGCATGCCCGGCTAAATTGA
PROTEIN sequence
Length: 125
AQRVPLVIEGDATVINALAPYIVALGKLSEVSAVAALPEADAPVALIGDMRLMLVVEIDKDEERARLAKEIARIQGEIKKAETKLANPSFVDKAPAAVVQQEQARLADFASMLQKLAAQHARLN*