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SCNpilot_expt_500_bf_scaffold_485_7

Organism: SCNPILOT_CONT_300_BF_Microbacterium_72_41

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(7124..7804)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CA5AF similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 226.0
  • Bit_score: 438
  • Evalue 4.10e-120
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:KEP75706.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 226.0
  • Bit_score: 437
  • Evalue 1.30e-119
mtrA; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K07670 two-component system, OmpR family, response regulator MtrA similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 226.0
  • Bit_score: 433
  • Evalue 5.50e-119
  • rbh

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Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGACTTCACGGATCCTGGTTGTCGACGACGACACCGCGCTCGCCGAGATGATCGGCATCGTGCTGCGCACCGAGGGATTCGAGACCGTGTTCTGCGCCGACGGCGCGCAGGCGGTCGACGCGTGGCGCACCGAGCGCCCCGACCTGATCCTTCTGGACCTCATGCTGCCCGGTGTCGACGGGATCGAGATCTGCACCCGCGTCCGCGCGGAGTCCGGCATCCCGATCATCATGCTGACCGCCCGCACCGACACCGCCGATGTCGTGAAGGGGCTCGAGTCCGGCGCCGACGACTACATCGTCAAGCCGTTCAACCCGAAAGAGCTCGTCGCCCGCATCCGCACGCGGCTGCGTCCGGCGCAGGCCCCGGCCGACGAGATGCTGCGGATCGGCGACCTCGTCGTCGACGTCGCCGCACACGAGGTCCGCCGCGGCGACAGCCCCATCGCGCTGACCCCGCTCGAGTTCGAGCTCCTCGTGGCCCTCGCCGAGAAGCCGCAGCAGGTCTTCTCCCGCGAGATGCTCCTCGAGCAGGTGTGGGGGTACCACTACAAAGCCGACACGCGTCTGGTCAACGTCCACGTCCAGCGCCTGCGCGCCAAGATCGAGGCCGATCCCGACAACCCGCGCATCGTGACCACCGTGCGCGGGGTGGGCTATCGCGCCGGCGCGGTGGCTTGA
PROTEIN sequence
Length: 227
MTSRILVVDDDTALAEMIGIVLRTEGFETVFCADGAQAVDAWRTERPDLILLDLMLPGVDGIEICTRVRAESGIPIIMLTARTDTADVVKGLESGADDYIVKPFNPKELVARIRTRLRPAQAPADEMLRIGDLVVDVAAHEVRRGDSPIALTPLEFELLVALAEKPQQVFSREMLLEQVWGYHYKADTRLVNVHVQRLRAKIEADPDNPRIVTTVRGVGYRAGAVA*