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SCNpilot_expt_500_bf_scaffold_485_26

Organism: SCNPILOT_CONT_300_BF_Microbacterium_72_41

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 29776..31176

Top 3 Functional Annotations

Value Algorithm Source
ligase n=1 Tax=Microbacterium sp. B19 RepID=UPI000344C431 similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 466.0
  • Bit_score: 798
  • Evalue 4.20e-228
  • rbh
lipid A core - O-antigen ligase similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 466.0
  • Bit_score: 794
  • Evalue 1.50e-227
  • rbh
Lipid A core-O-antigen ligase {ECO:0000313|EMBL:BAJ73512.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 466.0
  • Bit_score: 794
  • Evalue 6.60e-227

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGGCGATGTACACCAGTCACCCGGTCTCGGCGCTGCCGACCCCTCCCCCGCGGGAGACCACCGGGCACCTCCTCCTCCGCGCCTGGTGCGTCTTCGTGCTGTTCCTCGCCCTGGGCGGCGTCGGCGTGATCAACGCCGTCGGCTCCACGGTCACGGGCATCCTCGCGGTCGCCTCCGCGCTGGTGTCGACCGTCGTCTGGATCGTCGTCCGCCCTCCGGTCGCGGTGCGGCGTCTGCCGTTCCTGGCGTTCGGCTACGTCGCGTGGGCGGGACTGTCGATCCTGTGGAGCGCCTGGCCCGCGGCATCCGTGCTCACCTGGCTGCTGCTGGCGGTGACCACCTTCCAGGGGCTGTTCATCGGCGCCGTGCTGACCTGGCGCGACGTCGTGGGTGCCGTCGCCTCGGCCGCCAAGTGGGTCGTGGGGCTGTCGCTGCTGTTCGAGCTCGCCGTCTCGATCTTCGTCCGGGGTCCGATCCTGCCCGGCTTCCAGTCGCCCTCCGGCCGGATGGATCCCATCGTCTACTGGTCCCGCGACAACCTCTTCGACGGGGGTCGCATCCAGGGCATCTTCGGCAACGCCAACCTGCTGGGTGCGGCGATGCTCCTCGCGATCATCGTGTTCGCCATCCGCTACGCCGCGCGGGCCCCGCGCCGCTCGCTGCTCTGGGGCTGGATCGCGGTCGCCGCCTTCCTCTTCATCCGGGCCGGCTCCGCCACCACCGTGATCGCCGCGGCGTTCGTCGTGCTCGTGCTCGCAACGGTGCTGGTCATGCGCACGGCGGGTCGTCCGGGCGAGCGCACCCGCTGGTACGTGCTGTACGCGATCGTGGGACTCGGCGGCGGAGCCGCACTGTGGTTCGGCCGCGACGGCGTGTTCGGCGCGCTCGGCCGCGACGCCGATCTCACCGGGCGTGAGGGGATCTGGGCCGACGTGCTGGCGCGGGCCGATCAGCATCCGTTCCTCGGGTGGGGGTTCTCCACGCCCTGGATCTCGTCCGAGCCGCTCATCGACGGATGGATCGTGGATCACGGGCAGACCGTGATCCAGGCCCACAGCATGTGGCTCGACGCCTACTTCCAGCTCGGCGGGGTCGGCGTCGTGCTGCTCGCCCTGGTGTTCCTCGCCTACGTGTGGCGATCGTGGTTCTTCGCCGTGGACCGCCCGCGATGGGACCTGCGCGCCGACCGGCCGTACTCCCCCCTCACGCTGCTCCCGACGCTGGTGGGAGCCCTCCTGGTCGTGCAGGGCCTCACCGAGTCGACTCCCCTCCTGCTGTGGGGTTGGATGCTGGTGGTGCTCTTCGGGTCGAAGATCAAGCAGTCTCCCCTGCTGGGGGTCGGCCCGGCCGAACAGAGCATCGCCATCGAACGCGGCGAGTTCCAGAGATCGGGGTCGTGA
PROTEIN sequence
Length: 467
MAMYTSHPVSALPTPPPRETTGHLLLRAWCVFVLFLALGGVGVINAVGSTVTGILAVASALVSTVVWIVVRPPVAVRRLPFLAFGYVAWAGLSILWSAWPAASVLTWLLLAVTTFQGLFIGAVLTWRDVVGAVASAAKWVVGLSLLFELAVSIFVRGPILPGFQSPSGRMDPIVYWSRDNLFDGGRIQGIFGNANLLGAAMLLAIIVFAIRYAARAPRRSLLWGWIAVAAFLFIRAGSATTVIAAAFVVLVLATVLVMRTAGRPGERTRWYVLYAIVGLGGGAALWFGRDGVFGALGRDADLTGREGIWADVLARADQHPFLGWGFSTPWISSEPLIDGWIVDHGQTVIQAHSMWLDAYFQLGGVGVVLLALVFLAYVWRSWFFAVDRPRWDLRADRPYSPLTLLPTLVGALLVVQGLTESTPLLLWGWMLVVLFGSKIKQSPLLGVGPAEQSIAIERGEFQRSGS*