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SCNpilot_expt_500_bf_scaffold_485_27

Organism: SCNPILOT_CONT_300_BF_Microbacterium_72_41

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 31173..32504

Top 3 Functional Annotations

Value Algorithm Source
Lipid A core-O-antigen ligase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBQ3_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 424.0
  • Bit_score: 542
  • Evalue 4.00e-151
  • rbh
lipid A core - O-antigen ligase similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 424.0
  • Bit_score: 542
  • Evalue 1.30e-151
  • rbh
Lipid A core-O-antigen ligase {ECO:0000313|EMBL:BAJ73513.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 424.0
  • Bit_score: 542
  • Evalue 5.60e-151

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
GTGAGCGACGCACCGCCCGCGATGCGGCCGGACCCGCGGACCCTCCTGGCCTCGGCGGAACTCGCGCGGGCATTCGCGCTCGCGGTGTTCGTCGCGACGTTCGGCGGATCGGCGATCCGCGGCGCCGCGGGGGACGTCACGTACGCCACGATCCTCACCGGCCTCTGCCTCCTCGGCGGGGCGATGCTCGTCGCCCGGCGGCGCGAGGTCGAGATCCTGCACCTGGCGCCGACGACCCTCGTGCTGTTCGTCGTGTGGGCCGGCGCGAGCATCCTGTGGAGCACGGACGCGCTCCGCAGTGGCACCGGGTGGGCTTCCCTCCTCGGCGTCTCGTTCCTCGGCATCGTCGTCGGGCACGTGCGCGACGCGCATCAGAGCGTGCGCGCACTGGGGGACGTCCTGCGCTGGCTGTTGGCGGCTTCCCTGGTTCTCGAGATCCTCAGCGGCATCCTGTGGGACACTCCCATCCCTTTCCTCGGCATCCGTGGCGACATCGCGCGACTCGGCCCCGTGCAGGGTCTCTTCGGCAGCCGCAACGATCTGGGCGTCGTGACGGTCGTCGCCCTGCTGACGTTCCTGGTGGAATGGCGCACCCGCTCCGTCCGGCCCGCGACCGCGGCGGCCTCGGTGATCCTCGCGGCGCTGCTGGCCGTGCTGAGCGGCTCGCCGACCGTCCTGATCGTCGCGGTGGTGACGGCGCTCGCGGCCGCGGCGCTCGCCCTCGTGCGGGCGCTCCCCCCGCGCCGACGCCGGGCGGCCCAGGTCGGGCTCGGACTGTCGGTCGCCGTCCTCTCGGCCGTCGCCTGGGCGCAGCGCCTCGCGATCGCCGCCGCGCTCGACGGCCGCGCCGAACTGACGCTGCGCACCGACCTGTGGGGCGAGATCCTCCGACTTTCCGACGATCGGCCCGTCATGGGATTCGGGTGGTTCGGCCCCTGGGATCCCGCCGAGGCACCCTTCAGCACGCCCAACTTCACCCTCGGCCAGCAACACGCCTCGGCGTTGAACGCCCCTCTCGACGTCCTCCTGCAGCTCGGGTGGGTGGGCCTCGTGGTCTTCCTCTCCCTCTGCGCCCTCGCTATCGCGCGAAGCTGGCTCGTCGCCGGCGAGCGCCGCTCTGTCGTTCACACCTGGGCCCCGTTGACGCTCGTGGTCCTGCTGACGGTGTCCCTGTTCGAGAGTTCGGTGCTGTCGGGGCCGGGCCTGCTGCTCCTCGTCCTGTGCGCGGTCCGCGCCGGCCAGTCGCGCTCCTGGCGCGAGCGCCTGGAGCGTCGCTCCGAGCCCTTCGGCGGCCCGGCGTCCACTCAGGGCGGGCGCGAGAGCGGCGGGTAG
PROTEIN sequence
Length: 444
VSDAPPAMRPDPRTLLASAELARAFALAVFVATFGGSAIRGAAGDVTYATILTGLCLLGGAMLVARRREVEILHLAPTTLVLFVVWAGASILWSTDALRSGTGWASLLGVSFLGIVVGHVRDAHQSVRALGDVLRWLLAASLVLEILSGILWDTPIPFLGIRGDIARLGPVQGLFGSRNDLGVVTVVALLTFLVEWRTRSVRPATAAASVILAALLAVLSGSPTVLIVAVVTALAAAALALVRALPPRRRRAAQVGLGLSVAVLSAVAWAQRLAIAAALDGRAELTLRTDLWGEILRLSDDRPVMGFGWFGPWDPAEAPFSTPNFTLGQQHASALNAPLDVLLQLGWVGLVVFLSLCALAIARSWLVAGERRSVVHTWAPLTLVVLLTVSLFESSVLSGPGLLLLVLCAVRAGQSRSWRERLERRSEPFGGPASTQGGRESGG*