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SCNpilot_expt_500_bf_scaffold_1951_18

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(17681..17920)

Top 3 Functional Annotations

Value Algorithm Source
virulence-associated protein VapB-like protein id=12493693 bin=THIO_HI species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 80.0
  • Bit_score: 159
  • Evalue 1.30e-36
SpoVT/AbrB domain-containing protein {ECO:0000313|EMBL:CDH45899.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 78.0
  • Bit_score: 113
  • Evalue 1.50e-22
virulence-associated protein VapB-like protein similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 79.0
  • Bit_score: 111
  • Evalue 9.80e-23

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Taxonomy

Candidatus Contendobacter odensis → Candidatus Contendobacter → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGCAATCCCAACGACTTGCTCGACTGTTCCGTAACGGGCGCAATCAGGCCCTGCGTATTCCACGTGAATTCGAATTGCCGGGAGATGAAGTCATCATTCACAAAGAGGGCGATCGGTTGATTCTGGAACCAGTGAAAACACGCAATCTGCTCGGCATACTCGCTAAGCTGAAGCCGGTGAATGACGCTTTTCCTGATGTGGATAACGGCCTGTTGCCGCTTGACGACATCCGGCTGTGA
PROTEIN sequence
Length: 80
MQSQRLARLFRNGRNQALRIPREFELPGDEVIIHKEGDRLILEPVKTRNLLGILAKLKPVNDAFPDVDNGLLPLDDIRL*