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SCNpilot_expt_500_bf_scaffold_5297

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5297_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1409
DNA (1407bp) protein (469aa)
glycoside hydrolase family protein; K01188 beta-glucosidase [EC:3.2.1.21]
Glycoside hydrolase family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4F1_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_5297_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1464..3044
DNA (1581bp) protein (527aa)
O-glycosyl hydrolase n=2 Tax=Rhodanobacter denitrificans RepID=M4NAR8_9GAMM rbh
O-glycosyl hydrolase rbh
O-glycosyl hydrolase {ECO:0000313|EMBL:AGG87614.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_5297_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3031..4227)
DNA (1197bp) protein (399aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1E9_9GAMM
glucosamine--fructose-6-phosphate aminotransferase, isomerizing
SCNpilot_expt_500_bf_scaffold_5297_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4864..6234)
DNA (1371bp) protein (457aa)
cysteine synthase (EC:4.2.1.22) rbh
Cysteine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGE5_9GAMM rbh
Cysteine synthase {ECO:0000313|EMBL:EIL98536.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_expt_500_bf_scaffold_5297_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6386..6574)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1E7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93288.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5297_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6890..7549)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4ND17_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87732.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_5297_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7546..7890)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGE2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98533.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5297_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8147..9259
DNA (1113bp) protein (371aa)
Pilus retraction protein PilT n=2 Tax=Rhodanobacter denitrificans RepID=M4NAW7_9GAMM rbh
pilus retraction protein PilT rbh
Pilus retraction protein PilT {ECO:0000313|EMBL:AGG87730.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_5297_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9382..10044)
DNA (663bp) protein (221aa)
maleylacetoacetate isomerase (EC:5.2.1.2) rbh
Maleylacetoacetate isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMD5_9GAMM rbh
Maleylacetoacetate isomerase {ECO:0000313|EMBL:EIL93284.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_expt_500_bf_scaffold_5297_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10242..11411
DNA (1170bp) protein (390aa)
3-phosphoglycerate kinase (EC:2.7.2.3) rbh
Phosphoglycerate kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGD9_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_5297_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11411..12064
DNA (654bp) protein (218aa)
HAD-superfamily hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1E1_9GAMM rbh
putative phosphatase rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_5297_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12194..13570)
DNA (1377bp) protein (459aa)
transketolase (EC:2.2.1.1)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Transketolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMD8_9GAMM
SCNpilot_expt_500_bf_scaffold_5297_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14408..14971
DNA (564bp) protein (188aa)
autotransporter n=1 Tax=Dyella ginsengisoli RepID=UPI00034550B2
opacity protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_5297_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15153..15731
DNA (579bp) protein (193aa)
OmpA-like transmembrane domain protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE05_9GAMM rbh
OmpA-like transmembrane domain protein rbh
OmpA-like transmembrane domain protein {ECO:0000313|EMBL:AGG87723.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_5297_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15829..16215)
DNA (387bp) protein (129aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGD4_9GAMM
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:EIL98525.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Displaying 15 items

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