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SCNpilot_expt_500_bf_scaffold_12026

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_12026_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1151
DNA (1149bp) protein (383aa)
Putative RND family acriflavine resistance protein A n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W093_9GAMM rbh
Putative RND family acriflavine resistance protein A {ECO:0000313|EMBL:EIL92884.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
RND family efflux transporter, MFP subunit
SCNpilot_expt_500_bf_scaffold_12026_2
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1307..1714)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae 303K RepID=U6TAB3_KLEPN
Uncharacterised protein {ECO:0000313|EMBL:CRE19784.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
SCNpilot_expt_500_bf_scaffold_12026_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1744..2253
DNA (510bp) protein (170aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W601_9GAMM
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:EIL94892.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
SCNpilot_expt_500_bf_scaffold_12026_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2226..4142
DNA (1917bp) protein (639aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W601_9GAMM
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:EIL94892.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
SCNpilot_expt_500_bf_scaffold_12026_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4309..5337)
DNA (1029bp) protein (343aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEN2_9GAMM rbh
acyl-CoA dehydrogenase rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGG88417.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_12026_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5549..6478
DNA (930bp) protein (310aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM77_9GAMM rbh
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EIM00569.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
methylase involved in ubiquinone/menaquinone biosynthesis rbh
SCNpilot_expt_500_bf_scaffold_12026_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6504..6917
DNA (414bp) protein (138aa)
Cobalamin-dependent methionine synthase I n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM76_9GAMM
Cobalamin-dependent methionine synthase I {ECO:0000313|EMBL:EIM00568.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cobalamin-dependent methionine synthase I
SCNpilot_expt_500_bf_scaffold_12026_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6914..7558
DNA (645bp) protein (215aa)
Cobalamin-dependent methionine synthase I n=1 Tax=Rhodanobacter denitrificans RepID=I4WL75_9GAMM
cobalamin-dependent methionine synthase I
Cobalamin-dependent methionine synthase I {ECO:0000313|EMBL:AGG88415.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_12026_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7555..7887
DNA (333bp) protein (111aa)
methionine synthase (B12-dependent) (EC:2.1.1.13)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WL74_9GAMM
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:EIM00567.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_expt_500_bf_scaffold_12026_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7866..8393
DNA (528bp) protein (176aa)
methionine synthase (B12-dependent) (EC:2.1.1.13)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WL74_9GAMM
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:EIM00567.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_expt_500_bf_scaffold_12026_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8401..10149
DNA (1749bp) protein (583aa)
methionine synthase (B12-dependent) (EC:2.1.1.13)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM75_9GAMM
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:EIM00567.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_expt_500_bf_scaffold_12026_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10853..13501)
DNA (2649bp) protein (883aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTS8_9GAMM rbh
diguanylate cyclase (GGDEF) domain-containing protein rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG88407.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 12 items

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