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SCNpilot_expt_500_bf_scaffold_1097_19

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(18228..20357)

Top 3 Functional Annotations

Value Algorithm Source
(P)ppGpp synthetase, RelA/SpoT family n=1 Tax=Rhodanobacter denitrificans RepID=M4NH14_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 83.4
  • Coverage: 709.0
  • Bit_score: 1177
  • Evalue 0.0
  • rbh
(p)ppGpp synthetase, RelA/SpoT family similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 709.0
  • Bit_score: 1177
  • Evalue 0.0
  • rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 709.0
  • Bit_score: 1192
  • Evalue 0.0

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2130
ATGGCCGCCATCATGGCCCCGCGCACTCATTCAGGCAGCCTCGCCGCATGGCGCAAGCGCGCCGACACGCTGTCACCCGATCTGGCCGATGCGCTGGAGGCCTGCGGCGAGCATCCGGTCGACCAGGCCGAGTGCGGCGACACCCTCGACCTGCTCGGCATGCTCGGTTGTGACGCGTCGACCCAGGCGGCGGCGTTGTGGTTCGAGCTGGCGCGCGTCGATCCGGCGTTGTGGGCTGCGCGCGGCCCGGGCCTGCCGGCGGACGTGCAGCGCCTGGTCGCCGGCCAGCAGGCGGCCGAACAGGTGTGGACCTTGCACGCGCAGCGCGCACCCGGCGGGGCGACCGAAGGCCTGCGCCGGCTGTTGCTGGCGATCGTGCGCGACCTGCGCGTGGTGTTCGTGCTGCTGGCGCGCCAGCTCGCGCGGATGCGCGCCGCGGCGTCGCTGCCGCCGGAGCAGGCCGCCGCGCTGGCGCGGTTGAGCCGCGACATCCATGCCCCGCTGGCCAACCGGCTCGGCATCTGGCAACTGAAATGGGAGCTGGAGGACCTGGCGTTCCGCCACCTGCAGCCGGACACCTATCGCCGCATCGCCAAGCTGCTCGACGAGCGCCGCGTCGATCGCGAGGCATTCATCCGCCAGTCGCTGGACGAGCTGAAACAGGCGCTGGACGCCTCCGGCCTGCAGGCCGACCTGGCGGGGCGGCCCAAGCACATCTACTCGATCTGGAAAAAGATGCAGCGCAAGTCGCTGGATTTTTCCGACCTCTACGACATCCGCGCGGTGCGCGTGCTGGTCGACAGCGTCACCGACTGCTACGCCGCGCTGGGCGTGGTGCACGCGCTGTGGCCGCACCTGCCGAACGAGTTCGACGACTACATCGCGCGGCCCAAGCCCAACGGTTACCAGTCGCTGCACACCGCGGTGGTCGGGCCGCAGGGCAAGACGCTGGAGGTGCAGATCCGCACCCACGAGATGCATCGCGCCAACGAACTGGGCGTGGCCGCGCACTGGCGCTACAAGGAGGGCGGTGGCAGCGACGCCGAGTTCGAGGCCAAGATCGCCTGGATGCGCAAGCTGCTGGAGCCGCGCAGCGGCGACGACAGCAACCTCGCCGCCGAGCTGCAGACCGAGCTGCTGGAAGACCGCGTCTACCTGCTCACCCCCAAGGGCGAGGTGTTCGACCTGGCACGTGGCGCCACCGTGCTGGATTTCGCCTACCTGGTGCACACCGAGGTCGGCCACCGCTGCCGCGGCGCCAAGGTCAACGGCCGCATCGTGCCGCTGACCTTCCAGCCGCAGAGCGGCGACCGCGTGGAGATCCTCACCACCAAGGTCGCCGAACCCAGCCGCGACTGGCTCTCGCCGCACCATGGCTACCTCAACACCGCGCGGGCGAAGGACAAGGTGCGCGCGTGGTTCCGCCGCATCGCGCACGACGCCAACCTCGGCGTCGGGCGCGCCATGCTCGAGCGCGAACTGAAGCGCCTGGCGCTGCCCGCCGCCGACATCGGCAAGCTGCCCGCCCAATTCCACCTGCAGACGCAGGACGAGCTGCTGATCGCGCTGGCACTGGGTGAGGTCACGCCCGGCCAGATCGCCCGCGTGCTGCAGGAGGCGGCGCAGCCGCCGCCGCCCGCGCCGGCACCGCCGCCGGCGCGGCCGGCCACGCTGGACCAGGGCGCGCTGAGCATCGAAGGCGTCGGCAACCTGCTTACCACGCTGGCGCGCTGCTGCCAGCCGCTGCCGGGCGACGCGGTACGCGGCTACATCACCAAGGGCCGCGGCGTTTCGGTGCATCGTGCCGATTGCGGCAGCCTGGCGCGGCTCGCGCGGCGCGACCCGGACCGGGTGATCGAGGTGAGCTGGGGCCACGTCGCCAGCCAGGCTTACGAGGTGGACATCGAACTGCGCGGCTACGACCGCAAGGAGCTGCAGAAAGACGTCACCAACCTCATCAGCAACGCCGGCACCCACATCATCGCCTCGTCCAGCCGCTCGCGTCCGCAGACCGGCGAAGTGGAGATGCGCTACACCCTGCGCGTGCGCGATTTCGAACAGCTGTCCACCCTGCTGGGCAAGCTGCTGGCGCTGCCCAACGTCACTGAAGTGCGCCGCATCAGCGCCTAG
PROTEIN sequence
Length: 710
MAAIMAPRTHSGSLAAWRKRADTLSPDLADALEACGEHPVDQAECGDTLDLLGMLGCDASTQAAALWFELARVDPALWAARGPGLPADVQRLVAGQQAAEQVWTLHAQRAPGGATEGLRRLLLAIVRDLRVVFVLLARQLARMRAAASLPPEQAAALARLSRDIHAPLANRLGIWQLKWELEDLAFRHLQPDTYRRIAKLLDERRVDREAFIRQSLDELKQALDASGLQADLAGRPKHIYSIWKKMQRKSLDFSDLYDIRAVRVLVDSVTDCYAALGVVHALWPHLPNEFDDYIARPKPNGYQSLHTAVVGPQGKTLEVQIRTHEMHRANELGVAAHWRYKEGGGSDAEFEAKIAWMRKLLEPRSGDDSNLAAELQTELLEDRVYLLTPKGEVFDLARGATVLDFAYLVHTEVGHRCRGAKVNGRIVPLTFQPQSGDRVEILTTKVAEPSRDWLSPHHGYLNTARAKDKVRAWFRRIAHDANLGVGRAMLERELKRLALPAADIGKLPAQFHLQTQDELLIALALGEVTPGQIARVLQEAAQPPPPAPAPPPARPATLDQGALSIEGVGNLLTTLARCCQPLPGDAVRGYITKGRGVSVHRADCGSLARLARRDPDRVIEVSWGHVASQAYEVDIELRGYDRKELQKDVTNLISNAGTHIIASSSRSRPQTGEVEMRYTLRVRDFEQLSTLLGKLLALPNVTEVRRISA*