ggKbase home page

SCNpilot_expt_500_bf_scaffold_1915_19

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 28878..30248

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide biosynthesis protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVU0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 451.0
  • Bit_score: 721
  • Evalue 6.40e-205
  • rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EIL91331.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 451.0
  • Bit_score: 721
  • Evalue 9.00e-205
capsular polysaccharide biosynthesis protein CapK similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 460.0
  • Bit_score: 386
  • Evalue 1.50e-104
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGAAGACATCGTGGTACGAGAAGGCGTTTTCCCGCGTGCTCTACCCGCTGTGGGAGAGCGGCCTGCGGCGGCGGCACACGCTGGCGTACCTGGCCGACTACCAGCGCGACCAGTGGCTGGCGCCGGAGCAGATCGCCGCGCTGCAGTGGCAACGCCTGAAGCGGTTGCTGGAGCACTGCGAGCAGAAGGTTCCGTATTACCGGCAGCGCTGGCGCGAGGCCGGCGTCGCCGTCGCCGACATCCGCAACCTGGATGACTACGCGCAGCTGCCGGTGCTGACCAAGGCCGACATCCGCCAGCACTTCGATGCGTTGCAGGCCGAGGGCTGGCACGACCGCGTGCTGACCAAGGCCACCGGCGGCTCCACTGGTGACCCGCTGCGTTTCGGCTACACCCGCGAGAGCTACGAGCGGCGCACCGCAGTGATGTGGCGCGGCTACGACTGGGCCGGCTCGCGCATGGGCCGGCGCACCTTGTTCGTGTGGGGCGGGGCCGTGGGCACGCCGCACCGGCTCCAGCAGTTCAAGGACCGCGTGTACAACGCGGCGTTCGCCCGGCGCGTGCTCAACAGCTTCGGCATGACCGAGGCCAACATGGCCGGCTACGCCGACGCGATCGACGACTACCGCCCGCAGGTCATCGTCGGCTACGTCGGCCCGCTGGTGCGGCTGGCGCAATGGCTGCTCGACACCGGTCGCCGCGTGGCCGCGCCGCGGAGCATCATCGGCGCCGCGGAGTCGCTGCACGAGTTCCAGCGCGAGATCATCGAGCGTGCATTCGGCTGCCCGGCGTACAACACCTACGGCTGCCGCGAGTTCATGCTGATAGCCTCCGAATGCGAGCGTCGCGAAGGCCTGCACGTCAACGCCGATCACCTGGTGGTGGAGTTGCAGCGGCACCCCGGTGCGCCTGCCACCGAGCCGGGCGAGGTGGTGATCACCGACCTGTTCAACTACGGCATGCCGTTCGTGCGCTACCTCAACGGAGACGTCGCCACCGCGAGCGACCACGTCTGCAGTTGCGGTCGCGGCTTGCCGCTGCTGCAGCGCGTGGATGGCCGCCTGCTCGACGCGATCCGCACCCCGGCCGGCCACCTGCTGCCCGGCGAGTTCTTCCCGCACATGCTCAAGGACGTGCCGGGGCTGGTGCGCTTCCAGGTGGTGCAGCGCCGGCTCGACCAGCTCGAACTGTCGCTGGTGCGTGGTCCCGGCTTCGACGAAGCCTCGCTCGCCTACATCCGCCGCGAGCTGGCCAAGGTGGTCGGCGACAGCCTGCAATTGAACGTCCATTTCGTCGACGACATCCCGCTCACGCCCAGCGGCAAGTGGCGCGTGTGCATCTCCGAACTGCCGGCCGCGCCCGCGGCATGA
PROTEIN sequence
Length: 457
MKTSWYEKAFSRVLYPLWESGLRRRHTLAYLADYQRDQWLAPEQIAALQWQRLKRLLEHCEQKVPYYRQRWREAGVAVADIRNLDDYAQLPVLTKADIRQHFDALQAEGWHDRVLTKATGGSTGDPLRFGYTRESYERRTAVMWRGYDWAGSRMGRRTLFVWGGAVGTPHRLQQFKDRVYNAAFARRVLNSFGMTEANMAGYADAIDDYRPQVIVGYVGPLVRLAQWLLDTGRRVAAPRSIIGAAESLHEFQREIIERAFGCPAYNTYGCREFMLIASECERREGLHVNADHLVVELQRHPGAPATEPGEVVITDLFNYGMPFVRYLNGDVATASDHVCSCGRGLPLLQRVDGRLLDAIRTPAGHLLPGEFFPHMLKDVPGLVRFQVVQRRLDQLELSLVRGPGFDEASLAYIRRELAKVVGDSLQLNVHFVDDIPLTPSGKWRVCISELPAAPAA*