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SCNpilot_expt_500_bf_scaffold_1590_39

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(32030..32812)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 259.0
  • Bit_score: 459
  • Evalue 3.70e-126
tRNA pseudouridine synthase A n=1 Tax=Rhodanobacter denitrificans RepID=I4WLF0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 259.0
  • Bit_score: 463
  • Evalue 1.40e-127
  • rbh
pseudouridylate synthase I similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 259.0
  • Bit_score: 459
  • Evalue 8.20e-127
  • rbh

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGCGCATCGCCCTCGGCATCGAGTATGACGGCACCGATTTCTTCGGCTGGCAACGCCTGACCGAAGGGCCGAGCGTGCAGGGCGCAGTGGAGGAGGCCTTGTCGAAAGTGGCGGCCCATCCGGTGCTGGTCAGTTGCGCAGGACGCACCGACGCCGGCGTCCACGGCCGCTGCCAGGTGGTGCATTTCGATACCGATGCACGCCGCGAATTGCGCGGCTGGGTGCTGGGCGCGTGCTCGAACCTGCCGGCCAGCGTGGCCGTGTTGTGGGCGCAACCGGTGCCGGACAGCTTCCACGCGCGCTTCTCCGCGCGCAGCCGCCGTTATCGCTACCACATCCTCAACCGGCCGGTGCGCGCCGCGCTGGACGCGCGCTACGTCACCTGGGAGCGCCTGCCGCTGGACGCGCAGCGCATGCACGAAGCCGCGCAATCCTTGCTGGGCGAGCACGACTTCAGCGCATTCCGGGCGCTGTCGTGCCAGGCGCCGCACCCGCGGCGCTCGGTGCTCGAGATCAGCGTTCGCCGCGAGGGCGAGCACGTCATGCTGGAGATCGAGGCCAACGCCTTCCTGCACCACATGGTGCGCAACATCGCGGGTTCGCTGCTGCTGGTCGGTCGCGGCGAGCAGCCGGTGGAATGGATGGCCGAACTGCTCGCCGGCCGCGACCGCCAGGTGGCCGGACCGACTGCGCCGGCCTCGGGGCTGACCTTCATCGGCCCGCGCTACGAGGCACACTGGGGCCTGCCCACCGAAGTCTGCCTGACGGGAGCCGGCCCGTGA
PROTEIN sequence
Length: 261
MRIALGIEYDGTDFFGWQRLTEGPSVQGAVEEALSKVAAHPVLVSCAGRTDAGVHGRCQVVHFDTDARRELRGWVLGACSNLPASVAVLWAQPVPDSFHARFSARSRRYRYHILNRPVRAALDARYVTWERLPLDAQRMHEAAQSLLGEHDFSAFRALSCQAPHPRRSVLEISVRREGEHVMLEIEANAFLHHMVRNIAGSLLLVGRGEQPVEWMAELLAGRDRQVAGPTAPASGLTFIGPRYEAHWGLPTEVCLTGAGP*