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SCNpilot_expt_500_bf_scaffold_2620_8

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(5158..6675)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVG8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 507.0
  • Bit_score: 877
  • Evalue 7.80e-252
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 507.0
  • Bit_score: 877
  • Evalue 1.10e-251
preprotein translocase, SecA subunit similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 508.0
  • Bit_score: 871
  • Evalue 1.00e-250

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
GTGATCCCCACCCACAAGCCGATGATCCGCAAGGACAACCCGGACATGATCTTCCTGTCGCAGACACCGAAGTACAACTCGGTGATCGAGGACATCAAGGACTGCCACAAGCGCGGCCAGCCGGTGCTGGTCGGCACCACCTCGATCGAGGTGTCCGAGCTGCTGTCCGGGTTGCTGAAGAAGGCGGGCGTGGCGCACGAGGTGCTCAACGCCAAGCATCACGAGCGCGAGGCGCACATCGTGGCGCAGGCCGGCGCGCCCGGCCAGGTCACCATCGCCACCAACATGGCCGGCCGCGGTACCGACATCGTGCTCGGCGGCAGTCTCGAGGCCGCGCTGGCCGAACTGCCCGAAGGCGCCAGCGAGGTGGACCGCGCGCGCGTCAAGGCCGAGTGGAAGAAGCGGCACGAGCAGGTGCTGGCCGCCGGCGGCCTGCACATCATCGGCACCGAGCGGCACGAATCGCGGCGCATCGACAACCAGCTGCGCGGCCGCTCCGGCCGCCAGGGCGACCCGGGCTCCTCGCGCTTCTACCTGTCGCTGGAGGACAACCTGCTGCGCATCTTCGGCGGCGAAGGCCTGGTGCGCTGGATGAAGCGCTTCGGCATGAAGGACGACGACGCGCTGGAAGATCGCATGATCAGCCGGCAGATCGAGAAGGCCCAGCGCAAGGTCGAGCAGCACAACTTCGACATCCGCAAGCACCTGCTGGAGTTCGACGACGTCGCCAACGACCAGCGCAAGGTGATCTACACCCAGCGTGACGAATTGCTGGAGGGCGAGGAGGTCGCGGCCACCGTCGCCGACATCCGTGAGGATGTGGTGCAGACCCTGGTGCAGGCCTACGTGCCGCCGCAGACCATCGACGAGCAGTGGGATATCGCCGGCCTGGATCGCGAGCTGGAGAGCCAGTTCAACCTGTCGCTCGACCTCAAGCACTGGGTCGAGCAGCAGAGCGAGATCGACGCCGAGATGATCCGCAAGCACGTGGACGAGGCGGTCGCCGAGCTGTTCCACGGCAAGGAGGCGCAGATCGGGGCCGAGACCATGCGCCAGCTCGAAAAGCACGTGATGCTGACCGTGGTCGACAACGCCTGGAAGGACCATCTTTCCAGCATGGATTACCTGCGCCAGGGCATCTCGCTGGTGGGCTACGCGCAGCAGGACCCGAAGCAGGCGTTCAAGCGCGAGGCGTTCAAGCTGTTCTCCGACATGCTGGCGCGGATCAAGTCCGAGGTGGTGCAGATGCTTGCGCGCATCCGCATCCGCAGCGAGGAGGAAGTCGCCGCGATGGAGGCCGAGCAGCAGCGCATGGCCGAGCGCCTGCAGAAGCAGATGCTCGCCACCGGCGGCGGCGCGCCGCCCGATGCGTTCGGCAGTGCCGGCGCGGCCCCGGAAGACGGTGCCCACCTGGCCGCACAACCGGTGCAGCATGCCGGCCCCAAGGTCGGCCGCAACGAGCCATGCCCCTGCGGCTCCGGCAAGAAGTACAAGCATTGTCACGGACAGCTGAGCTGA
PROTEIN sequence
Length: 506
VIPTHKPMIRKDNPDMIFLSQTPKYNSVIEDIKDCHKRGQPVLVGTTSIEVSELLSGLLKKAGVAHEVLNAKHHEREAHIVAQAGAPGQVTIATNMAGRGTDIVLGGSLEAALAELPEGASEVDRARVKAEWKKRHEQVLAAGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDNLLRIFGGEGLVRWMKRFGMKDDDALEDRMISRQIEKAQRKVEQHNFDIRKHLLEFDDVANDQRKVIYTQRDELLEGEEVAATVADIREDVVQTLVQAYVPPQTIDEQWDIAGLDRELESQFNLSLDLKHWVEQQSEIDAEMIRKHVDEAVAELFHGKEAQIGAETMRQLEKHVMLTVVDNAWKDHLSSMDYLRQGISLVGYAQQDPKQAFKREAFKLFSDMLARIKSEVVQMLARIRIRSEEEVAAMEAEQQRMAERLQKQMLATGGGAPPDAFGSAGAAPEDGAHLAAQPVQHAGPKVGRNEPCPCGSGKKYKHCHGQLS*