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SCNpilot_expt_500_bf_scaffold_2312_21

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(23705..25168)

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHZ4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 462.0
  • Bit_score: 787
  • Evalue 1.00e-224
  • rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:EIL99085.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 462.0
  • Bit_score: 787
  • Evalue 1.40e-224
arabinose efflux permease family protein similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 494.0
  • Bit_score: 786
  • Evalue 4.20e-225
  • rbh

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1464
ATGCCCGACATGGCCAGCCCAGCCGCCGCGGACGCCCCTTCAGCAACGGTTTCGGCCGCCTTGCCCGAGCCGTCCACGCGCGAGCGCTTCCGCGGCCTGCTGTGGCTGGTCGCGGCGGCCTTCTTCATGCAGGCGCTGGATTCCACCGTGGTCAACACCGCGGTGCCGATGATGGCCGTGGCGCTGGAGGTAACCCCGCTGGGCATGCGCACGGCGCTGACCAGCTACGTGCTGACCCTGGCGATCCTGATCCCGGCCAGTCCGTGGCTGTGCGACCGGCTGGGCACGCGGCGGGTGTTCGGCGCCGCGATCGTGGTGTTCGGGCTGGGTTCGCTGCTGTGCGGGCTGGCGCAGACGCTGCCGCAACTGGTCGCCGCGCGCGTGCTGCAGGGCATCGGTGGCGCCTCGCTGATGCCGGTCGGGCGCTACGTGCTGGTGCGCAGCATCGACAGGCGCGAGTTCGTGCGCGCGATGAGCACGGTGGCCACCTTCGGCCTGCTGGGTTCAGTACTCGGCCCCCTGCTCGGCGGCGCGCTGGTGGAGTTCACCTCGTGGCGGCTGATCTTCCTGATCAACGTGCCGGTGGCGATCGCCGGGGTGTGGATGAACCGGCGCGACATGCCGGACTACCGGCTGGAGCGCGCACACCGTTTCGACCTGTTCGGCTTCGGGCTTTTCGCCGCCGCCTCGGCCCTGCTGCTGATCGCCTCGGAGCTGGCCGGCGCCACGCCGGTGCCGTGGATGCGCATCGGCCAATGCAGTCTGGCGGCGGTGCTGCTGGGCCTGGCCTATGTGTGGCACAGCCGACGCACCGCCTTTCCGGTCGCCGACCTGACCCTGCTCAAGGTGCGCAGCGTGTGGGTGGCGCTGGCCGGCGGCCTGTTCACCCGGCTCGGCATCTCCGGCATGTTCCTGTTGCTGGTGCTGTTCCTGCAGGTCGGTTGCGGCTGGTCGCCGCTGATGGCCGGCCTGATGATGGTGCCGCAGGCATTGGGTTCGATCTGCGCCAAATGGGCGATCAATCGCGTGCTGGTGCACCTGGGTTACCGCCGCCTGCTGCTGGGCAACACCTTGATCGTGGCCATGCTGCTGGCGGCGTTTGCCCTGCTCGGACCGGCCACGCCGGTGTGGGCCATCGCGACGTTGACGTTCTGCTACGGCGGCTTCGCCGGGCTGCAGTACACCGCGATGAACACGCTGATCTATCACGACCTGGACATCGCGCACGCCTCGATGGCTTCGTCGATGGCCTCGACCGTGCAATACCTCGCGATGAGCTTCGGCATCGCGCTGTCCACGCTGCTGATGCAGGCGCTGCTGCAGGGGCATGAGCGCGCGGATTATGTCGAGGCGTTCCGCTGGACGGTGCTGCTGCTGGCGCTGGTCACGGCGGCGGCCAGCCGCGTGTTCGGCCGGCTGCGGCACGATCGCCCGCTGTCGCGAGCCGGCGCGGCGGCAGGTTGA
PROTEIN sequence
Length: 488
MPDMASPAAADAPSATVSAALPEPSTRERFRGLLWLVAAAFFMQALDSTVVNTAVPMMAVALEVTPLGMRTALTSYVLTLAILIPASPWLCDRLGTRRVFGAAIVVFGLGSLLCGLAQTLPQLVAARVLQGIGGASLMPVGRYVLVRSIDRREFVRAMSTVATFGLLGSVLGPLLGGALVEFTSWRLIFLINVPVAIAGVWMNRRDMPDYRLERAHRFDLFGFGLFAAASALLLIASELAGATPVPWMRIGQCSLAAVLLGLAYVWHSRRTAFPVADLTLLKVRSVWVALAGGLFTRLGISGMFLLLVLFLQVGCGWSPLMAGLMMVPQALGSICAKWAINRVLVHLGYRRLLLGNTLIVAMLLAAFALLGPATPVWAIATLTFCYGGFAGLQYTAMNTLIYHDLDIAHASMASSMASTVQYLAMSFGIALSTLLMQALLQGHERADYVEAFRWTVLLLALVTAAASRVFGRLRHDRPLSRAGAAAG*