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SCNpilot_expt_500_bf_scaffold_3118_7

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(5737..6228)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WY34_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 163.0
  • Bit_score: 307
  • Evalue 6.10e-81
  • rbh
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 96.9
  • Coverage: 163.0
  • Bit_score: 307
  • Evalue 1.90e-81
  • rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGG88721.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 163.0
  • Bit_score: 307
  • Evalue 8.50e-81

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GTGAATTCGAGCGACGCCGTGCGCGAAGGACTGATCCCGCTGTTGCCGCGCCTGCGCCGGCTGGCGCGGGCGCTGGCCGGCCAGGCCGCCGACGCCGACGACCTGGTGCAGATCGTGCTGGAGCGCGCGCTCGCTCGTGCCGCGCAGTGGCGGCCGGATGCCGCGCTGGATCGGTGGGTGTTCGCGATCGCACGCAATGCCTGGCGCGACGAACTGCGCGCGCGCGGCCGTTCGCAGCATCTGTTCGCGCCGGAGGAAGCCGGCGAGATGGCGGCCGACCGCGCCAGTGCGCAGCCGGCGCAGCAACTGGAACTGGCGATGGCGCTGGCGGCGCTGCCGCCGGACCATCGCGAAGTGGTGGCCCTGGTGCTGGTCGAGGGCATGTCCTACGGCGAGGCCGCCGAGCTGCTGGAGGTGCCGGTGGGCACCGTCACCAGTCGCCTGGCTCGCGCCCGCGCCACCTTGCAGGCCCACCTTGGGAAAGAAGCATGA
PROTEIN sequence
Length: 164
VNSSDAVREGLIPLLPRLRRLARALAGQAADADDLVQIVLERALARAAQWRPDAALDRWVFAIARNAWRDELRARGRSQHLFAPEEAGEMAADRASAQPAQQLELAMALAALPPDHREVVALVLVEGMSYGEAAELLEVPVGTVTSRLARARATLQAHLGKEA*