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SCNpilot_expt_500_bf_scaffold_3118_13

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(14239..15708)

Top 3 Functional Annotations

Value Algorithm Source
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 482.0
  • Bit_score: 689
  • Evalue 4.10e-195
Alpha amylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQW5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 482.0
  • Bit_score: 691
  • Evalue 5.90e-196
  • rbh
glycosidase similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 482.0
  • Bit_score: 686
  • Evalue 5.90e-195
  • rbh

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1470
GTGTGGTACGAAATCTTCGTGCGCAGCTGGGTCGACACCAATGGCGACGGCATCGGCGACTTGAACGGCGTCACCGCGAAACTCGATTACCTGCAATCGCTGGGCGTCAGCGGCATCTGGCTGATGCCGATCAATCCCTCGCCCAGCTACCACGGCTACGACGTCACCGACTACCGCGGCATCAACCCCGAGTACGGCACCCTGGCCGACTTCGACCGCCTGCTGGCCGAGGCGCACAAGCGCGGCATCAGGATCATCATGGACCTGGTCATCAACCACAGCAGCAGCGAGCACCCGTGGTTCAAGGCCGCGCGCGATCCGGCCAGCCCGTACCACGACTGGTACCAGTGGTCGAACAGGCACACCGATCTCGATGCGGTGAGCGCCACCGGCTCGCCTGCGTGGCACGCGCTGGGCAAGCAGCACTACCTCGGCATCTTCGTCGACCAGATGCCGGACCTGAACTTCGACAACCCGGCCGTGCGCAAGGAGATGATCGACATCGGCCGGTTCTGGTTGAAGCGCGGCGTCGACGGCTTCCGCCTCGACGCGGCCCAGCACGTCTATTACGACTTCGAGAACCAGCGCCACGACCCGAAGATCCTGGCGAAGAACCTCGCCTGGTGGAGCGAGTTCCGCCACGGCATCGACAGCGTCGATCCGCAGGCTTATGTCGTGGGCGAAGTCACCCGCGACACCGAGGCCGAGCTGGCGCCGTGGTTCAAGCCGCTCAGCGGCGTGTTCAACTTCCCGCTGGCCGTGCAGCTGATCGAAAGCGCCCGCAGCGGCCACGCCGGCAAGCTGCCCGCCCTGCTCGACGGCACCACGCAGGCCTATCACGCGGTCACCGGCAAATACGGCATGGACGTGCCGTTCCTGTCCAACCACGACCAGGAACGCGTGATGAGCCAGCTGCACGACAACCCGCAGCAGATGCGCATCGCCGCAGCGATGCTGCTGACCCTGCCCGGCGAGCCGTTCATCTACTACGGCGAAGAACTCGGCATGCGCGGCAAGAAGCCCGACCCCGACCTGCGCGAGCCGATGCGCTGGTATCGCGACCCGCAAGGCACCGACCAGACGCACTGGAAGGCTTTCAGTGCCGGCGACGGCCCGGACATCACCGTGCAAGCGCAGCAGGATGATCCGCACTCCCTGCTGACGCGCTATCGCGAACTGATCGGCTGGCGCCGTCACATCGGCGCCTTGCGTGATGGCGCGCTGACCACGCGCGACTTGGGCAACCCGCAATTAATCGCGTGGGAGCTGCGTGATGCGCACGGTGCGGTGCTGGTGGTGCACAACCTGTCCGGCAGCGCGCAAACCATCCGGCTCGCTGCGCACGACCTGCAACGCTATGCCGGCGTGCGCGCCCGTACCGAGGACGCGACTACGCTGGCGCAAGGTGTGCTGCACCTGCCGGCGTACGGCTCGGCGGTGCTGCAAACGGCATCGGCCAGCACCAAGTGA
PROTEIN sequence
Length: 490
VWYEIFVRSWVDTNGDGIGDLNGVTAKLDYLQSLGVSGIWLMPINPSPSYHGYDVTDYRGINPEYGTLADFDRLLAEAHKRGIRIIMDLVINHSSSEHPWFKAARDPASPYHDWYQWSNRHTDLDAVSATGSPAWHALGKQHYLGIFVDQMPDLNFDNPAVRKEMIDIGRFWLKRGVDGFRLDAAQHVYYDFENQRHDPKILAKNLAWWSEFRHGIDSVDPQAYVVGEVTRDTEAELAPWFKPLSGVFNFPLAVQLIESARSGHAGKLPALLDGTTQAYHAVTGKYGMDVPFLSNHDQERVMSQLHDNPQQMRIAAAMLLTLPGEPFIYYGEELGMRGKKPDPDLREPMRWYRDPQGTDQTHWKAFSAGDGPDITVQAQQDDPHSLLTRYRELIGWRRHIGALRDGALTTRDLGNPQLIAWELRDAHGAVLVVHNLSGSAQTIRLAAHDLQRYAGVRARTEDATTLAQGVLHLPAYGSAVLQTASASTK*