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SCNpilot_expt_500_bf_scaffold_3363_19

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 17530..17694

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPN0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 67.0
  • Bit_score: 96
  • Evalue 7.20e-18
Cold shock protein {ECO:0000313|EMBL:EIM01422.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 67.0
  • Bit_score: 96
  • Evalue 1.00e-17
cold shock protein similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 67.0
  • Bit_score: 95
  • Evalue 5.00e-18

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 165
ATGACTTTCGGTACGGTCAAATGGTTCAACGACGCCAAGGGTTTCGTCCATTTTTCGGCGATCGCCAGCAAGGGCTTTCGCAGCCTGCAGGAAGGTCAGCGGGTGAAGTTCGAAGTCACCCAAGGTCCCAAGGGCGCCCAGGCCTCGGCGGTCGAAGCCGCCTGA
PROTEIN sequence
Length: 55
MTFGTVKWFNDAKGFVHFSAIASKGFRSLQEGQRVKFEVTQGPKGAQASAVEAA*