ggKbase home page

SCNpilot_expt_500_bf_scaffold_4213_5

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 5599..6591

Top 3 Functional Annotations

Value Algorithm Source
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 271.0
  • Bit_score: 423
  • Evalue 2.80e-115
Peptidase M15D vanX D-ala-D-ala dipeptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN80_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 271.0
  • Bit_score: 423
  • Evalue 2.00e-115
  • rbh
D-Ala-D-Ala dipeptidase vanX similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 235.0
  • Bit_score: 378
  • Evalue 3.00e-102
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGACCAACCCGTCGCCCATCACCGCCGGCAGGAGCCCGCTTGCGGGCGATGCTCCCGTGCCTGGCGGAAGAAAAGGCATCGCCCGCAAGTGGGCTCCTGCGAAAGCCGGGCATCTGATCGCGTTTGCCCTGCTCGTCGCCGTCAGCGGCATCACCCACGCGGACCAGCCGCCGGCGCTGTCGCCGGCGACGACTGCCGCCGCGGCGACCCTGGTCGACATCCGCACGCTGGTGCCGGACATCGCCGAGGACATCAAGTACGCCGGCAGCGACAACTTTATGGGCACGCCGGCGGACGGCTATCGCGCGCCGGCCTGCCTGCTGCTGCGCCCGGTCGCCGAGGCGCTGGCGAAGGTCGAGCACGAGCTGCGCGCGCAGCACCGGCGCCTGAAGATCTGGGACTGCTACCGCCCCGCCCGCGCGGTGGCGCACTTCGTGCGCTGGGCGCACGACCTTTCCGACCAGCGCACCAAGCCGCAGCACTACCCGCGGCTGGACAAGTCCGAACTCCTGCACGGCTACATCGCGGAAAGCTCGGGTCACAGCCGCGGCGCCACCATCGACCTGACCATGCAGCAGTGCGCCGACGACGGCACGCATTGCACGCCGCTGGACATGGGCACCGATTTCGATTTCTTCGACGTGCGCGCGCACACCGACTCGCCCGAGGTGACCGCGCAGCAGCACGCCAACCGCGTGGTGCTGCGCGACGCCATGCAACGCGAAGGCTTCCGCAATTACCCGATGGAGTGGTGGCATTACACCCTCGAACCGGAGCCCAACCATGCGCCGATACCCGTAGGGCGGGCACTGCCCGCCGGCTCTTCGGCGCGGCGCAACGCGCTTCGCAAATGCGGCGGGCAGTGCCCGCCCTACGAGGCACGATCAACGAGGGGAGATCCGCCATGCACAGACTCTTCATCGGCCTCGCCGCTGCCATCCTGCTCGCCGGCTGCGGCGGAACCAAGCCGGTCGATCCGGTCGACGCGCTGA
PROTEIN sequence
Length: 331
MTNPSPITAGRSPLAGDAPVPGGRKGIARKWAPAKAGHLIAFALLVAVSGITHADQPPALSPATTAAAATLVDIRTLVPDIAEDIKYAGSDNFMGTPADGYRAPACLLLRPVAEALAKVEHELRAQHRRLKIWDCYRPARAVAHFVRWAHDLSDQRTKPQHYPRLDKSELLHGYIAESSGHSRGATIDLTMQQCADDGTHCTPLDMGTDFDFFDVRAHTDSPEVTAQQHANRVVLRDAMQREGFRNYPMEWWHYTLEPEPNHAPIPVGRALPAGSSARRNALRKCGGQCPPYEARSTRGDPPCTDSSSASPLPSCSPAAAEPSRSIRSTR*