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SCNpilot_expt_500_bf_scaffold_4641_12

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(12526..14487)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system Vgr family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0T0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 662.0
  • Bit_score: 1007
  • Evalue 8.40e-291
  • rbh
Type VI secretion system Vgr family protein {ECO:0000313|EMBL:EIL93071.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 662.0
  • Bit_score: 1007
  • Evalue 1.20e-290
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 659.0
  • Bit_score: 595
  • Evalue 2.40e-167

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1962
ATGCCGCATCAAATGACACTGAAGTCAGATCTCGGTGACAAGCTGCAACCAGCCAGCTTTTCCGGCAGCGAACAACTGGGGCAGCTGTTTTCGTACAACCTCAAAGTACTCAGCAAGGATGGCGAAGTTGCGCTGCTGCCGTTGCTGGGCAGCTCGATGACCGTCACGTTCGACACCGGCGACTACACCCGGCATTTCAACGGCATCGTGGCGGAGATTTCGCAGACGGGGTTCGAGAGCTTTTCCGGCAAGCGCCAGGCGGAGTACGCGTTGACCCTGGTGCCGAAGCCCTGGTTGCTGCTGCACAAGATCGATTGCCGCATCTATCTCAAGAAGTCCGTGCCGACGATCGTCAAGGACGTGCTCGCCGAAATCGGCTACAGCGACGTCAAGCTGAGCCTGAGTGGCGACTACCCGGAGCGCGATTACTGCGTGCAGTACCGCGAGAGCTACTTCAACTTCATCAGCCGACTGATGGAGCAGGAGGGCATCTACTATTTCTTCCAGCACCGTGATGGCGTGCACACGATGGTGCTGGCCGATTCGCTCGGTGCGCACGGAGCCACCGGCGGCTTCGACGAATTGCCGTATCGGCCGCAGACCGGCACCAGCAAGGCGTCAAGCGAGCCGGCGATCACCGAGTTCAGCACCGCGCGTTCGGTGCAGACGATCAAGTATTCGCTGACCGACTACGACCCGCTGGACCCGAAGAAGTCGCTGCTGGGGTTCGAGTCGATCAGCAACGCCGACGGCAACCATCGGGTGCCCAAGCTCGATTCGTTCGACTACCCCGGCGACCACCTGACCGCCGCCGCCGGCAAGCATTACGCGCAGGTTCGGCTGGAGGCGATCAACGTCGCGCAGTCGCTTTGCACCGGCGCGACCAACGTCTGCGGCGTGCTGACCGGCGCGCTGTTCAAGCTGACCAAGTTCCCGCGCGCGGAGTTGAACCAGGAATACCTCGTGGTCGGCTCCACCGTGCACATCGAGAATGCCGCCGAGGTCTCCGGCGTGCAGGGCAGCAACCAGTTCTTCTGCCATTTCTCGGCGATCCAGAGTCGCCAGCCGTTTCGCAGCATGCCGACCGCGGTCAAGCCCGGCATCGTCGGCCTGCAGACCGCGGTGGTCTCCGGCAGCGACACCGCCGAAGACATCTCGGTGGACAAGTACGGCCGCATCCAGGTCACGTTCCACTGGAACAAGCCGGACAAGGAAAACTTCCACATCTCCTGTCCGGTGCGCGTGGCCTCCTCGTGGGCCGGCAAGAACTGGGGCGCGGTGAACATCCCGCGCGTCGGCCAGGAAGTGGTGGTGAGCTTCCTCGAAGGCGATCCGGACCGGCCGCTGGTGATCGGCAGCGTCTACAACGCCGACAACATGCCGCCGTACACGCTGCCCGACAACATGACCCAGAGCGGCATCAAGAGCCGCAGCCACAAGGGCGGCGGCGCGGAGGATTTCAACGAGCTTCGCTTCGAGGACAAGAAGGGCAGCGAAGACTTCTTCATGCATGCGCAGAAGGACATGCATGTGGAAGTGGAGAACGACCGTGTCGTGACGGTGGACCACGACGAGAAGATGACCGTCAAGAACGACCAGACCGAGGACGTCACGGGCAAGCGCACGACCACCGTGGGCAAGGACGACAAGCTTGACGTCACCGGCAACGGCACGACCACCATCGGGCAGAAGTTCAAGCTCAGCGCGGGCACCGAGATCGAGCTGGTGACCGGTGCGGCGAGCATCGTGATGAAGTCATCCGGCGCCATCGACATCAAGGGCGTGAACGTCAGCATCAAGGGCGTGAGCGTCAAGATCGACGGCGACGCCACGGTGGCGGCCAAGGCCGGTGCCTCGGCGGAGTTTTCCAGCAGCGGTGCGACCACGGTCAAGGGCACCATGCTGTCGCTCAAGGGCGACGCCATGGCGCAGTTGTCCGGCGGCATCATCATGATCGGCTAG
PROTEIN sequence
Length: 654
MPHQMTLKSDLGDKLQPASFSGSEQLGQLFSYNLKVLSKDGEVALLPLLGSSMTVTFDTGDYTRHFNGIVAEISQTGFESFSGKRQAEYALTLVPKPWLLLHKIDCRIYLKKSVPTIVKDVLAEIGYSDVKLSLSGDYPERDYCVQYRESYFNFISRLMEQEGIYYFFQHRDGVHTMVLADSLGAHGATGGFDELPYRPQTGTSKASSEPAITEFSTARSVQTIKYSLTDYDPLDPKKSLLGFESISNADGNHRVPKLDSFDYPGDHLTAAAGKHYAQVRLEAINVAQSLCTGATNVCGVLTGALFKLTKFPRAELNQEYLVVGSTVHIENAAEVSGVQGSNQFFCHFSAIQSRQPFRSMPTAVKPGIVGLQTAVVSGSDTAEDISVDKYGRIQVTFHWNKPDKENFHISCPVRVASSWAGKNWGAVNIPRVGQEVVVSFLEGDPDRPLVIGSVYNADNMPPYTLPDNMTQSGIKSRSHKGGGAEDFNELRFEDKKGSEDFFMHAQKDMHVEVENDRVVTVDHDEKMTVKNDQTEDVTGKRTTTVGKDDKLDVTGNGTTTIGQKFKLSAGTEIELVTGAASIVMKSSGAIDIKGVNVSIKGVSVKIDGDATVAAKAGASAEFSSSGATTVKGTMLSLKGDAMAQLSGGIIMIG*