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SCNpilot_expt_500_bf_scaffold_4641_28

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(32183..33235)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecY n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL49_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 350.0
  • Bit_score: 634
  • Evalue 7.90e-179
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 350.0
  • Bit_score: 634
  • Evalue 1.10e-178
preprotein translocase, SecY subunit similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 350.0
  • Bit_score: 626
  • Evalue 5.20e-177

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
ATGATGGGCGCGGTGGTGCCGAGCCTGCAGGCCCTGCGCAAGGAAGGCGAGGCCGGCAAGCGCAAGATGACGGCGTACACCCGTTATGCCACGGTGCTGCTGGCGGCGTTCCAGTCCTTCGGCATTGCGGTTGCCTTGCAGGGCCAGGTGGCCGCGGGCGGCGCGCCGGTGGTGTACACGCCGGGCTTCGGCTTCGTGTTCTCGTCCGTGGTAGGCCTGACCGCCGGCACCATGTTCCTGATGTGGCTGGGCGAACAGATGACCGAGCGCGGCATCGGCAACGGCATCTCGCTGCTGATCTTCGCCGGCATCGTGGCCGGCTTGCCCGGCGCGGTGGTGCACACGCTGGGCATGGCCAACAACGGTGAGCTGTCGCTGCTCATGCTGCTGGTGGTGTTCGGGCTGGTGCTGGCCGTGACCGCCTTCGTGGTGTTCGTGGAGCGCGCCCAGCGGCGCATCACGGTGAACTACGCACGACGTTCGGGCGGACAGAAGGCCTATCAGAACCAGAGCTCCAGCCTGCCGCTGAAGATCAACATGTCGGGCGTGATTCCGCCGATCTTTGCGTCGAGCTTGCTGATGTTCCCGGCCACCGCGGTGAGCTGGTTCAGCACGGGTCATTCGTCGCGTTGGGTGCAGGATCTGACGCAGTCGCTGAGTCCGGGCAACCCGTTGTATGAAATCACCTTTTCGGTACTGGTGATCGGTTTTGCATTCTTCTACACCGCGATCGTGTTCAACGCGGAAGAGACGGCGGACAACCTGAAGCGCTCCGGCGCCCTGATTCCCGGCATTCGTCCGGGCAAGGCCACGGGCAGCTACATCGACGCGGTGATGACACGCCTGACGGCGGTCGGCGCGATCTACCTGGTGCTGGTGTGCCTGGTGCCGTCGTTCATGCAGCAGGCGTGGCACGTACCGTTCTATTTCGGCGGCACCTCGCTGCTGATCGTGGTGGTGGTGGTGATGGATTTCACGGCGCAGATCCAGGCGCATCTGGTCAGTCATCAGTACGAAAGTTTGCTCAAGAAAGCCAACCTCCGTCGCAGTTGA
PROTEIN sequence
Length: 351
MMGAVVPSLQALRKEGEAGKRKMTAYTRYATVLLAAFQSFGIAVALQGQVAAGGAPVVYTPGFGFVFSSVVGLTAGTMFLMWLGEQMTERGIGNGISLLIFAGIVAGLPGAVVHTLGMANNGELSLLMLLVVFGLVLAVTAFVVFVERAQRRITVNYARRSGGQKAYQNQSSSLPLKINMSGVIPPIFASSLLMFPATAVSWFSTGHSSRWVQDLTQSLSPGNPLYEITFSVLVIGFAFFYTAIVFNAEETADNLKRSGALIPGIRPGKATGSYIDAVMTRLTAVGAIYLVLVCLVPSFMQQAWHVPFYFGGTSLLIVVVVVMDFTAQIQAHLVSHQYESLLKKANLRRS*