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SCNpilot_expt_500_bf_scaffold_4947_5

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(3272..4603)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A core--O-antigen ligase-like protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 443.0
  • Bit_score: 731
  • Evalue 6.00e-208
  • rbh
lipid A core-O-antigen ligase-like enyme similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 443.0
  • Bit_score: 729
  • Evalue 5.50e-208
  • rbh
Lipid A core-O-antigen ligase-like enyme {ECO:0000313|EMBL:AGG87533.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 443.0
  • Bit_score: 729
  • Evalue 2.50e-207

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
ATGACGACCTTCGGCAGTTCACTCAAGGCGGCGCTGCGTTCCCCCCTGCTGCCGTTCTGGCTGGTAATTGCGCTGCTGCCGTTCGGTCGCAGTTCGGAGCTGGGCACGCTGCTGTGCCTGCTCGGCGCGATCATGCTGTTTGCACGCGACCCGGCCGCACTGCGCCAGCACCCCGGCGCGCAGCTGCTGCTGTGGCTGCTGGGAGCGTATGTGGCGGCGGCGTTGTTTTCCGCGCTGGACGCGATTCGTCCCGGCAAGAGCTGGAGCACGGTGGCCGCCACGCTGCGTTACGTTCCGCTGGGCCTGTACGCGTGCTTCGCGATCCGTCGCGAGGCCAAACTGCACGCTTTGTACACGGCGGTCGCCGCGGTGCTGGCGCTGTGGTGTGCGGATGCGTGGGTGCAGGCGTTCACCGGCTGGAGTCTGGGCGGCCATCCCGAGGCCTTTCGGGTCTCGGGCATTTTCGGCGCCGACAACCTGAAACTGGGCCCGAGCCTGGCGGTGCTCTCGCCGTTCGCATTGTGGGCAGCGCGGCAGCGCTGGGGGCGGCCGGGGTTGGTGCTGGCCGCAGTGCTGGTGCTCGGCCCGGTGCTGCTGGCCGGCTCGCGTTCGGCGTGGCTGTGCTACGTGCTGGTGCTGGCGGGTTTCGCCTGGCAGGAGGCGCGCACGCTGTGGCGCTTCTCGTTGTGGTGCGGGGCGGCGGCGCTGCTGCTGGCACTGGCTGGCGTGGTGGCATGGAATACCTCGGCGCGCTTCCATGACCGGATGGCGCGCAGCCTGCTGGTGTTGCAGGGTACCGATCAGTCGGTGGACACCGCGCTCAGCGGCCGGCTCGATATCTGGCAGGTCGGCGTGGCGATGACCGCGGCGCATCCGGTCAACGGCGTGGGCGTGCGCGGATTCCGCTACGCCTATCCGCAGTTCGCGCCGGCCGACGACCACTTCGTGGTGTCGGCCGAAGCGTGCGGCGTCGGCGAAGGCGCCTGCCATCCGCACCAGCTGCTGCTGGAGATCCTCACCAATACCGGCCTGCTCGGGCTGGCGCTGTGGCTGGCCGCGGCGGGTCTGGCGTGGCGGGCATGGCGGCGGGTGGGCGCGGCGGCGCGCGCACGCGCGTTCCCCGCCAGCCTGGCGCTGGGCGTGATGCTGTTTCCGCTGAACTCGCACCTGGCGTTCTACTCGGCCTGGTGGGGGCTGCTGTTCGCCTGGCTGCTCGGGCTGTGGTGCGCCAGTTTGTTCGTTGCCGGCATCCCTGCCGGCAACGAAGAGCCCGGCATCCGTGCCGGACTCCTCAACGCAGAACCCCCTCAGGGGACGCCCGATGGGGCGTGA
PROTEIN sequence
Length: 444
MTTFGSSLKAALRSPLLPFWLVIALLPFGRSSELGTLLCLLGAIMLFARDPAALRQHPGAQLLLWLLGAYVAAALFSALDAIRPGKSWSTVAATLRYVPLGLYACFAIRREAKLHALYTAVAAVLALWCADAWVQAFTGWSLGGHPEAFRVSGIFGADNLKLGPSLAVLSPFALWAARQRWGRPGLVLAAVLVLGPVLLAGSRSAWLCYVLVLAGFAWQEARTLWRFSLWCGAAALLLALAGVVAWNTSARFHDRMARSLLVLQGTDQSVDTALSGRLDIWQVGVAMTAAHPVNGVGVRGFRYAYPQFAPADDHFVVSAEACGVGEGACHPHQLLLEILTNTGLLGLALWLAAAGLAWRAWRRVGAAARARAFPASLALGVMLFPLNSHLAFYSAWWGLLFAWLLGLWCASLFVAGIPAGNEEPGIRAGLLNAEPPQGTPDGA*