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SCNpilot_expt_500_bf_scaffold_6017_30

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(31741..34512)

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-2 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKE6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 938.0
  • Bit_score: 1510
  • Evalue 0.0
  • rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 938.0
  • Bit_score: 1510
  • Evalue 0.0
bacterial translation initiation factor 2 (bIF-2) similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 939.0
  • Bit_score: 1502
  • Evalue 0.0
  • rbh

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2772
ATGTCGGACGTCACGATCAAACAACTCGCCCAGGTACTGGGCATGCCGGTCGACAAGTTGCTGACGCAGCTTGGCGAAGCGGGCATGAAATTCTCCGACCAGGAGCAGGTCATCAGCAGCACCGAGAAGGTGAAACTGCTCGGATTCCTGCGCCGAACCCACGGCAAGGCCGAAGCCGCCGCCGAGGTTGCGGATGCGGCACCGCGCCAGATCACCCTGCGACGACGCACGGTGGGCGAATTGAAGGTGGCCGGCTCCGGTGGTCGTGGCGCCGCCGGCCCCGCCAAGACGGTAAACGTGGAAGTGCGCGCCAGGCGCACCTACGTCAAGCGCAGCGTGATTGCCGAGGAGGCCAGCGCCGAACCCGAGCGCGAGGAGGCCGTGCGCAAGCTGCAGGAATCGCAGCAGCAGCGCGAGCGCGAGGAGCGCGAACGGCTGGATTCCGAGCAGCGCCGCGAGAAGGACGCGCGCCAGCGCGAGCTCGACGAACAACAGCGCCAGGAAGAAGCCCGGCGTGCCGAAACGGCCGCCGAAGCGCAGAGCGCGGCGGATCTCGCAGAACCCGCGCCGGAAGCGCCTGCCGAGGAGCCGGTGGTCGCCAGCGAACCCGTCGACGAGGAGCCGGGCGTGCAACGCATGGACCAGCGCGAGCTGGGCATGATCCTTCCGCGCATCCACGAGCCGCGCAAGCGCGAAAAACTGGTCAAGCCGCCCGCCCCGGCACCGGCTCCCGCACCGGCGCCCGCGCCGGCAGCGAGCGATGCGGCTCGCGGCGGCAAGGCACGGCATGGCCGCGAGCGCAGCGAGGACGTCGGCAGCAAGCACGAGCGCGACGGCAGCAAGCGCTTCGCCGGCGGCCAGATGCACCTCAGCGAGGCCGATCGCGCACGCCGCTCGTCCTCCAGCACCAAACGCGGCAAGGGCGGGCGCAGTGGCGGTCGCGACCTGCTGGCGCGCGGCAGCGGCGTGTCCGGCGGAACGCACGGGTTCTCCCGTCCCACCGCACCGGTGGTGCGCGAGGTGGTGGTGAGCGACACCAACGTGGTGGCCGATCTCGCCCAGAAGATGGCGGTGAAGGGCTCCGAGGTGGTGAAAGCCCTGTTCAAGATGGGCGTGATGGCGACGATCAACCAGACCGTCGACCACGACACCGCCGTGCTGGTGGTCGAGGAACTCGGCCATACGCCGGTGGCGGACAACCAGAACAACGCCGAGGAGACGCTCGCGGCGCATACCCAGAACATCGAGCTGGAAGGCGAGAAGGTTCCGCGGCCGCCGGTAGTGACGATCATGGGTCACGTCGACCACGGCAAGACCTCGCTGCTCGACTACATCCGGCGCACCAAGGTGGCATCCGGCGAAGCCGGCGGCATCACCCAGCACATCGGCGCGTACCACGTGAAGACCTCGCGCGGCGTGATCACCTTCCTCGACACCCCGGGCCACGCGGCGTTCACCTCGATGCGCGCCCGCGGTGCGCAGTCGACCGACATCGTGATCCTGGTGGTGGCTGCCGACGACGGCGTCAAGCCGCAGACGATCGAGGCGGTCAAGCATGCCCGCGCGGCCAACGTGCCGATCATCGTGGCGGTCAACAAGATGGACAAGGACGGTGCCAACCCCGACAACGTGAAGCAGGGCCTGGTTGCGCAGGAAGTGGTGCCGGAAGACTGGGGCGGCGACGTGCAGTTCGTGCCGGTGTCGGCCAAGACCGGCATGGGCATCGAGGAACTGCTCGAAGCGATCTCGATCCAGGCCGAGGTGATGGAGCTCAAGGCGGTGGCCGACGGCCGCGCCTCCGGCGTGGTGATCGAATCCAGCCTGGATCGCGGCCGCGGTCCGGTGGCCACCGTGCTGGTTCAGCAGGGCACGTTGCGCAAGGGCGACTTCGTGGTCTGCGGCATCGAGTACGGGCGCATGCGCGCGTTGATCAACCAGTCCGGCAAGCAGGTGGACGAAGCCGGTCCGTCGATTCCCGTGCAGGTGCTCGGTCTGTCCGGCGTGCCCGAGACCGGCGACGATTTCGTCTGCGTCGAGGACGAGCGTCTGGCCCGCGAAGTGGCGCAGGAGCGTGAGCTCAAGCGGCGCGAGACGCGGATGGTCAGCAAGAGCAACCGTCTGGAAGACATCATCGCCAAGATGGGCCAGGGCGACGAGCAGCAGACGCTCAACATCCTGGTCAAGGGCGACGTGCAGGGGTCGGTGGAGGCCTTGCGCGAGTCGCTGACCCAGATCGGCAACGAGCGCGTGCGGGTCAACGTGGTGTCCTCCGGCGTGGGCGGCATCAACGAATCCGACGCCACGCTCGCCGCTGCGTCCAAGGCGCTGGTGATCGGCTTCAACGTCCGTGCCGACGCATCGGCGCGCAAGGTGATCGAAACCAACGGCCTGGACGTGCGTTACTTCTCGATCATCTACGACGTGATCGATCAGGTCACCCAGGCGGCCACCGGCCTGCTCGGCATGGAAGTGCGCGAGGACATCATCGGCATCGCCGAGGTGCGCGACGTGTTCCGCAGTTCCAAGTTCGGTGCCGTGGCCGGTTGCATGGTCACCGAGGGCCACGTCAAGCGCAGCAAGCCGATCCGCGTGCTGCGCGACAACGTGGTGGTGTTCGAGGGCGAGCTGGAATCGCTGCGCCGCTTCAAGGACCTCGTGGAAGAAGTCCGCAGCGGCATGGAGTGCGGCATCGCCGTCAAGCAGTACAACGACGTCAAGGTCGGCGACCAGATCGAATGCTTCGAGCGCACGGAAGTGGCTCGCACCTTGTGA
PROTEIN sequence
Length: 924
MSDVTIKQLAQVLGMPVDKLLTQLGEAGMKFSDQEQVISSTEKVKLLGFLRRTHGKAEAAAEVADAAPRQITLRRRTVGELKVAGSGGRGAAGPAKTVNVEVRARRTYVKRSVIAEEASAEPEREEAVRKLQESQQQREREERERLDSEQRREKDARQRELDEQQRQEEARRAETAAEAQSAADLAEPAPEAPAEEPVVASEPVDEEPGVQRMDQRELGMILPRIHEPRKREKLVKPPAPAPAPAPAPAPAASDAARGGKARHGRERSEDVGSKHERDGSKRFAGGQMHLSEADRARRSSSSTKRGKGGRSGGRDLLARGSGVSGGTHGFSRPTAPVVREVVVSDTNVVADLAQKMAVKGSEVVKALFKMGVMATINQTVDHDTAVLVVEELGHTPVADNQNNAEETLAAHTQNIELEGEKVPRPPVVTIMGHVDHGKTSLLDYIRRTKVASGEAGGITQHIGAYHVKTSRGVITFLDTPGHAAFTSMRARGAQSTDIVILVVAADDGVKPQTIEAVKHARAANVPIIVAVNKMDKDGANPDNVKQGLVAQEVVPEDWGGDVQFVPVSAKTGMGIEELLEAISIQAEVMELKAVADGRASGVVIESSLDRGRGPVATVLVQQGTLRKGDFVVCGIEYGRMRALINQSGKQVDEAGPSIPVQVLGLSGVPETGDDFVCVEDERLAREVAQERELKRRETRMVSKSNRLEDIIAKMGQGDEQQTLNILVKGDVQGSVEALRESLTQIGNERVRVNVVSSGVGGINESDATLAAASKALVIGFNVRADASARKVIETNGLDVRYFSIIYDVIDQVTQAATGLLGMEVREDIIGIAEVRDVFRSSKFGAVAGCMVTEGHVKRSKPIRVLRDNVVVFEGELESLRRFKDLVEEVRSGMECGIAVKQYNDVKVGDQIECFERTEVARTL*