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SCNpilot_expt_500_bf_scaffold_6266_6

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(5032..5859)

Top 3 Functional Annotations

Value Algorithm Source
formamidopyrimidine-DNA glycosylase Fpg (EC:4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 275.0
  • Bit_score: 514
  • Evalue 2.30e-143
  • rbh
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 275.0
  • Bit_score: 514
  • Evalue 1.00e-142
Formamidopyrimidine-DNA glycosylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJM4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 275.0
  • Bit_score: 515
  • Evalue 2.50e-143
  • rbh

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
GTGCCCGAACTGCCGGAAGTCGAAACCACCCGCCGCGGCATCGCGCCGTACCTGATCGGCCGTCGCGTCAGCGGCGTGCTCCTGCGCCGTCCCGATCTGCGCTGGCCGATCCCGCCCGAGATCGGCGAGCTGCTGCCCGGCCAGCGCATCGACGCGGTGGAACGCCGCGCGAAATACCTGTTGCTGCACACCGCCGCCGGCAGCGCGCTGCTGCATCTGGGCATGAGCGGCGTGCTGCGTGTGCTGCCGCCCGACGCGCCGGTGGGCAAGCACGATCATGTCGACATCGCGCTGGAACGCAGCGCCGCGCAGGCATCGCGCGTCCTGCGCTTCACCGACCCTCGCCGCTTCGGCTGCCTGCTGTGGCAACCGCCGGGCACCACGCACGAGCTGCTGGCCCATCTCGGCCCCGAACCGCTGACCGACGCCTTCGACGGCGAGCTGCTGTGGCGTCGCTCGCGCGGACGCACGGCGGCGGTGAAGCTGTTCCTGATGGACAACGCCGTCGTCGTCGGGGTGGGCAACATCTACGCCAGCGAGGCGCTGTTCCGCGCCGGCATCGATCCGCGCCGCGCCGCCGGCGGCGTTTCGCGGGCGCGCTACGAACGACTGGCTGCCGAAGTGAAGCACCTGCTGGCATGGGCGATCGAGCGCGGCGGCACCACCTTGCGCGACTTCCTCAACCCCGACGGCGCACCTGGCTATTTCTTCCGCGAGCTGATGGTCTACGGCCGCGCCGGCGAACCTTGCCGGGTCTGCAGCAGCGCCATCCGGCAGGCCGTGCTGGGCCAGCGCTCCACCTTCTGGTGCCCGCACTGCCAGCGCTGA
PROTEIN sequence
Length: 276
VPELPEVETTRRGIAPYLIGRRVSGVLLRRPDLRWPIPPEIGELLPGQRIDAVERRAKYLLLHTAAGSALLHLGMSGVLRVLPPDAPVGKHDHVDIALERSAAQASRVLRFTDPRRFGCLLWQPPGTTHELLAHLGPEPLTDAFDGELLWRRSRGRTAAVKLFLMDNAVVVGVGNIYASEALFRAGIDPRRAAGGVSRARYERLAAEVKHLLAWAIERGGTTLRDFLNPDGAPGYFFRELMVYGRAGEPCRVCSSAIRQAVLGQRSTFWCPHCQR*