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SCNpilot_expt_500_bf_scaffold_5832_21

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 16799..17731

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding protein DksA n=2 Tax=Rhodanobacter denitrificans RepID=M4NEI0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 330.0
  • Bit_score: 301
  • Evalue 8.30e-79
RNA polymerase-binding protein DksA similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 330.0
  • Bit_score: 301
  • Evalue 2.60e-79
RNA polymerase-binding protein DksA {ECO:0000313|EMBL:AGG88352.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 330.0
  • Bit_score: 301
  • Evalue 1.20e-78

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
GTGTTGAATGCATCGGCTATAACACGCGCGAGTTCGACCGCCGCCAAGGCGCACAAGGGCAAGACGCCCAACAAGGCTGGCACCAAGGCCGTCAAGTCGAAGCCGGTGGCAGGCAAGGGGCAGGCTGCCAAGGTCGCCGCGAAGTCCCCTGCACGGGCCGCCGCGAAACCCGCCAGCAAGGCCACCCCGAAGAAGGCTGCGCCGCACACCAAGGCCTCCAGGCCGACTGCCCACGCACCGGCCAAGAGGGCCGCGGCGGGCAGCAAGGCCGCCAAGGGCAGGACGCCGGCGAGCAAGGCCGCGGTGAAGAAAGCGCCGGCGAAGAAGGTCGTTGCCAAAAAGGCCGTGACGAAACATCCCGTCGTGAAGCATCCCGCAGTGAAGAAGGCTCCCGCGAAGAAGGTATCGCCCGGGAAGGCTGCAGCGGGCAAGGCACCGGCCAGCAAGGTCGCGGCGAAGCCCGCGGCGAAGAAGCCGGCGCCCCGGCCGGTGCACGGCAAGGCCGCCAAACCGGCGGCACCGGCAGCCAAGGCGCCGGCAACCCACGCGGCACGACCGGAGCCGGTCGCGGCGACCATCCACCATTCTCCTTCACCCGCGAGCAGGCTTTTCAAGGGCAAGGTGGCAAGCGCCACGGCCATGGTCAGCGCTCCCGGGAATCATGCTTCCTCCCACAAGAAATCGAAGAATTCGTCGTCCCCAATGAATAAACTGGCAACAAAAACTCTAGACAGCGGCGTCACCCGTGAAGACGGGCGATACGCCTTGCCCTCCACCAGCACGATCTCCTTGCCCAAGGGTTATCGCCCGAGCAGCGACGAGGAGTACATGAACCCGCGACACCTGGCCTACTTCCGCAACAAGTTGCGTGAATGGCGCGACCAGCTGGTGGAAGAGTCGCGCCAGACCATGGACAACCTGCGCGAGGAAGTG
PROTEIN sequence
Length: 311
VLNASAITRASSTAAKAHKGKTPNKAGTKAVKSKPVAGKGQAAKVAAKSPARAAAKPASKATPKKAAPHTKASRPTAHAPAKRAAAGSKAAKGRTPASKAAVKKAPAKKVVAKKAVTKHPVVKHPAVKKAPAKKVSPGKAAAGKAPASKVAAKPAAKKPAPRPVHGKAAKPAAPAAKAPATHAARPEPVAATIHHSPSPASRLFKGKVASATAMVSAPGNHASSHKKSKNSSSPMNKLATKTLDSGVTREDGRYALPSTSTISLPKGYRPSSDEEYMNPRHLAYFRNKLREWRDQLVEESRQTMDNLREEV